Helobdella robusta: HELRODRAFT_86723 Help Entry HELRODRAFT_86723  CDS       T03272                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism hro  Helobdella robusta Pathway hro03020   RNA polymerase hro03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:hro00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     HELRODRAFT_86723   09124 Replication and repair    03420 Nucleotide excision repair     HELRODRAFT_86723  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hro03021]     HELRODRAFT_86723    03400 DNA repair and recombination proteins [BR:hro03400]     HELRODRAFT_86723 Enzymes [BR:hro01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      HELRODRAFT_86723 Transcription machinery [BR:hro03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      HELRODRAFT_86723 DNA repair and recombination proteins [BR:hro03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       HELRODRAFT_86723 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_3 RNA_pol_Rpb1_7 RNA_pol_Rpb1_4 Motif Other DBs NCBI-GeneID:  20216657 NCBI-ProteinID:  XP_009026318 JGI:  Helro1_86723 UniProt:  T1G6G0 LinkDB All DBs Position Unknown AA seq 1353 aa AA seqDB search MAECPGHFGHIVLSKPVFHAVFLPKIIKVMRCVCFYCSRLLVDPELPKMKMILSKTKSDF NRRQNLVYNLCKVKTTCECRSGDVETGEKMEQDVQVEGCGRHQPKIRKIGLELTAEWNVL NHESQEKKIVLTAERVLEIFREITDETCSYLGMDARYARPDWMIATILPVPPLPVRPSVL NFGAARSQDDITYKLADIIKINNKLKRNEEQGAPPHILDENIKLLQYHVATMINNEMPGQ PKATQRCGRPLKSITERLKGKEGRVRGNLMGKRVDFSARTVITPDPMLKIDQVGVPMTIA KNLTYPELVTPFNIDRLTQLVHRGPNNYPGARYIIKQNNVRIDLRYHRKLSDLHLQIGET VERQMLDDDYVIFNRQPTLHKMSMMCHKVKVLPYSTFRLNLSATTPYNADFDGDEMNLHL AQSLETRAEISQLSSVKRMIITPQANRPVMGIVQDSLTAVNKMTRRDSFIDKKNMMDLIM YIPHWNGKIPQPAILKPEPLWTGKQLFSLIIPGQINCIRTHSTHPDDEDRGPYKWISPGD TKVIVENGQLLSGILCKKSLGPSSGSLQHIIYHELGREATGDFYSHVQMVTNQWLLTEGH SIGVADIIADYKTYMDIQLAVMEAKANVADITYKAQKGELELTPGNTFIQTFENQVNRIL NDARDQTGRLAQDSLSDFNNFKTMVVAGSKGNRINISQIIACVGQQNVEGKRIQFSFRDR TLPHFLKNDHGPESQGFVENSYLAGITPTEFYFHAMGGREGLIDTAVKTAETGYIQRRLI KAMESVMVKYDGTVRNQAEELIQLRYGEDGLAGEWVEFQNLPSLKPSDKAFEREFKFDLF NEKKLKRCLYEDVLRDMHRDANFSFEIEREYEQLLDDRMAVRQIFPNGESRVVLPCNLQR MIWNAQKFFKINHKRPSDLNPLKIIKDVRELSKKFMIVKGEDRLSKAANTNATLLMNILM RSTLCSKKVIEEFHLSSEAFDWLIGEIETKFTQAQVEPGEMVGALAAQSLGEPATQMTLN TFHYAGVSSKNVTLGVPRLKEILSISKKPKTPTLTVFLTEQVAKDAEKAKDVLCLIEHAT LGKVASSSAIIYDSDIRHSVVKEDQDWINTYYDLPDIDLNRLLPWLLRIELDRKRMTDRR LTMEQIAEKITAGFGDDLNVIFTDDNAEKLTLRIRLNKQADKENQETVEDEFDKITDDKF LKLIETNLLKDLTLQGISNISKAYLVHPTSDEKKRIIIDEKGEFKTIQEWILETDGTNLR SVLTVENVDHVRTISNDIVEIFDVLGIEAVRKAIEREMNNVISFDGSYVNHRHLALLCDV MTAKGHLMAITRHGLNRQETGALARCSFEEMVC NT seq 4062 nt NT seq  +upstreamnt  +downstreamnt atggcggaatgtccgggtcatttcggacatattgtgctctcgaaaccagttttccatgca gtattcttgccgaagatcattaaagttatgagatgtgtttgcttctactgttccagattg ctcgttgatccggaactgccaaaaatgaagatgatattaagtaaaactaaaagtgacttt aatcgtagacaaaatttggtatacaacctctgcaaagttaaaaccacctgtgagtgtagg agtggggatgtcgaaacaggagagaaaatggaacaagatgtgcaggtggaaggatgcggt cgtcaccagccgaaaatcagaaagattggtttggagttgacggcagaatggaatgtgctt aatcacgagagccaagaaaaaaagattgtgctgacggccgaacgcgttcttgagatcttc cgggagatcactgacgagacgtgctcgtatttaggaatggacgccaggtacgcacgacct gattggatgattgcgaccatcttaccagtgcctccactgcctgttagaccgtctgtcctc aatttcggagcagctaggagtcaggatgacataacatacaaactggccgacattataaag atcaacaacaaattgaagcgcaacgaagagcaaggagctcccccccacattttagatgaa aacattaaattacttcagtatcatgtggctaccatgattaacaacgaaatgcctggacag cctaaagccactcagagatgtggtcgtccgttgaaatccatcacagagcgtttgaagggc aaggaaggtcgtgtccgtggtaatctcatgggaaagagagttgatttttcggcgaggaca gttattacaccagaccccatgttgaagattgatcaagttggcgttcctatgacaattgcc aaaaacctcacctatccagagctggtcacccccttcaacatcgataggttgactcaactg gtacatagagggcccaacaattaccctggtgctaggtacataatcaagcaaaataatgtt cgcattgatctaagatatcatcgtaaattatctgatctacatcttcaaattggggaaacg gttgagcgtcaaatgctagacgacgattacgtgatcttcaatcgtcagcccacattgcac aagatgtccatgatgtgtcacaaggtcaaagtattgccttattccacatttagactaaac ctcagtgctacaaccccttacaatgccgatttcgatggcgacgaaatgaacctccacctt gctcagtccctcgaaacaagggcagagatcagtcagctgtcatcagttaaaaggatgatc ataactccacaagccaacagacccgttatgggcattgttcaagattccctgaccgctgtt aataaaatgactagaagagattcgtttattgacaagaaaaacatgatggaccttatcatg tacataccacattggaatgggaaaatacctcaaccggcgattttaaaacccgaacctctc tggaccggcaagcaacttttctccctcataattcccggccagataaactgcatacgtact cacagcacgcatcccgacgatgaagacaggggaccgtacaaatggatctcacccggagat acgaaggtaattgttgagaacggacagctacttagtggaattctgtgcaagaaatcactt ggacctagttctggatcactccagcatattatctaccacgaattgggacgcgaagcaaca ggagatttttactcgcacgtacaaatggttaccaatcagtggcttcttactgagggacac agcattggtgtagcagacattattgcagattataagacatatatggatatccaattagct gtcatggaagccaaagccaatgtagctgatattacctataaagctcaaaagggtgagctg gaactaactcctggtaacacttttatacaaacctttgaaaatcaggttaatcgtatcttg aatgatgcaagagaccaaacaggcagattggctcaggattctttatcggactttaacaac tttaaaacaatggtagttgctggatcaaaggggaatagaatcaatatttcacaaatcata gcctgtgtagggcaacaaaatgtagagggcaaacgtatccaatttagtttccgtgatcgg actcttcctcacttcctgaaaaacgatcatggacctgaaagtcaaggtttcgttgaaaat tcttacctggccggaattacgcctactgaattttacttccacgcgatgggcggtagagaa ggattgatcgataccgctgtcaaaactgctgaaactggttacattcagcgccgtctcatc aaggccatggagagcgtgatggtcaaatacgacggtacagtgagaaaccaagctgaggag ctcatccagttgcgctacggagaggatggtttagcgggcgagtgggtggagttccagaat ctgccatctctcaaaccgtctgacaaagcatttgagagagaatttaaatttgacctattc aacgaaaagaaactgaagcgctgtttatatgaagatgtcttgagagatatgcatcgtgat gcaaacttttcattcgagatcgaacgggagtacgaacaactgctcgatgaccgcatggca gtcaggcagatatttccaaacggagagagtagggttgtccttccgtgcaatcttcaacgg atgatttggaacgcacaaaaatttttcaaaataaaccataagaggccatcagatcttaat cctttaaaaattataaaagatgtgcgcgaactcagcaagaaattcatgatcgtgaaggga gaggataggctgagtaaggccgccaatacaaatgctactctgctcatgaatatattaatg agatctacgctatgctctaagaaggtcattgaagaatttcatctctcctctgaagcgttt gattggctcatcggtgaaatcgagacgaagtttacccaagctcaagttgaaccgggcgag atggtgggtgcacttgccgcccagtccctcggcgaacctgccactcagatgactctcaac actttccactacgcgggagtgtcctcgaaaaatgtaactctgggtgttcctagattgaaa gagattttaagcatctcaaaaaagcccaaaactcctacgttgactgttttcctgactgaa caagtagctaaggatgctgagaaggctaaggatgttctctgtctgatagagcatgctaca ttaggcaaagttgcatccagctctgcaattatttacgatagtgacattaggcactccgta gtcaaggaagatcaggattggatcaacacgtactacgacctacctgatattgacttaaat cgcttgttgccatggctgctgagaattgagttggataggaagagaatgactgatagaaga ctaacaatggagcagatagcggagaagatcacagcaggatttggcgatgatttgaatgtc atcttcactgacgacaacgcagaaaaattaactcttagaatcagattgaacaaacaagct gacaaggaaaatcaagagacagttgaagatgaatttgacaaaataacagacgacaaattc ctcaaactcattgagaccaacctgttgaaagatctaaccctgcaaggcatcagcaacatc tcaaaggcgtacttggttcatccgacgtcagatgaaaagaaacgcatcatcattgacgaa aaaggcgagttcaaaaccatacaagaatggatacttgaaactgacggcaccaacctgcgt tctgtgttgacagttgagaatgtcgaccatgttagaaccatctcaaatgacatcgttgag atttttgacgtcctgggaatcgaggcagtacgtaaagcgattgaacgcgagatgaacaac gtcatctcatttgacggctcctacgtcaaccacagacacctcgctctgctctgcgacgtc atgacggccaaaggccatctgatggcaataactcgtcacggtctcaacaggcaagagacc ggtgcactggctcgatgctcttttgaagaaatggtttgttga

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