Helobdella robusta: HELRODRAFT_87327
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Entry
HELRODRAFT_87327 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K10282
F-box and leucine-rich repeat protein 16
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hro04121
]
HELRODRAFT_87327
Ubiquitin system [BR:
hro04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
HELRODRAFT_87327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box-like
LRR_8
F-box
Post_transc_reg
Motif
Other DBs
NCBI-GeneID:
20216738
NCBI-ProteinID:
XP_009026849
JGI:
Helro1_87327
UniProt:
T1G6P1
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
ISPLLQNEKFLLKFFRHFSPLQFGSLAQVCSTWRDVLYNRPEFWSDIVPVINFRDSQQTN
EQTRCKLYSSFQRRKFDSLILIGLSNTDVIDLNRNFSYCRSGVRRLAIRHTNISDRSLKQ
LIELVSHVTELELTGCNEVTEAGLWGCLVPRLTKLTLADCINVADDSLGAVSQLLPNLRE
LNLQAYHVTDTALTMFSTRQSSNLKALRLLSCWEISNHGVVNVIRSLPNLTTLSLSGCTK
VTDDGVEVVAENLRQLRTLDLSWCSRITDASLECIACDLNLLEELVLDRCTHVSDVGVGF
LATMTSLQRLYLRWCGLVRDFSLQHIFSMRNLQVLSVAGCNLITAAGVAGASQLTTLREL
ELTNSSVLASAELVQYLHESLPGCVIIQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atcagcccgctgctacaaaacgagaaatttcttttaaaatttttccgccatttcagtcct
ttgcagttcggcagcctggctcaggtctgcagtacctggagagatgttctctacaaccga
ccggaattttggtcggatatcgttccggtgatcaattttagagactcccaacagaccaat
gaacaaactcgttgcaaactttactcgagtttccagagaagaaaatttgattctctgatc
ttaatcggattatcgaacaccgacgtaatcgatttaaaccgaaacttctcatactgtcga
agcggtgttcgacgtctggcgatccgacacacgaatatatccgatcggtcgttgaagcaa
ctgatcgaactcgtatcccacgtcaccgaactcgagctgacgggctgcaatgaagtgaca
gaagcagggttgtggggctgcttagttccgaggctaactaaactgacgttggccgattgt
atcaatgtagccgacgatagcctaggagctgtttctcaacttttaccgaacctccgagag
ctgaatctgcaggcctaccacgtgacagacacggcgctcaccatgttcagcaccaggcag
tcgagcaatctgaaagctctgaggctcctatcttgctgggagatctccaaccatggggtt
gttaatgtcatcagatccctaccaaacctgacgacactctccctatcgggctgcaccaag
gtcaccgacgatggagtggaggtggtggccgagaacttgcggcaacttcgcacccttgac
ctttcctggtgcagtagaatcacggacgcgagcctggaatgtatcgcttgtgatctcaat
ttgctggaagagttggtactggatagatgcacgcacgtgagtgacgtgggcgtgggcttt
ctggcgacgatgacgtcattgcagcgtctctacctgagatggtgtggtctggttagggac
ttcagtttgcagcacatcttctcaatgaggaacctacaagttctttcggtcgcaggctgc
aacctaataacagcagcgggagttgccggggcaagccagctgaccaccctcagagaactt
gaactaaccaacagctccgtactggcctctgccgaacttgtgcagtacctacacgagagt
ttacctggttgtgttattatccagtag
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