Helobdella robusta: HELRODRAFT_91040
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Entry
HELRODRAFT_91040 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K19636
usherin
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hro03037
]
HELRODRAFT_91040
Cilium and associated proteins [BR:
hro03037
]
Primary cilia and associated proteins
USH complex and associated proteins
HELRODRAFT_91040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
fn3
Laminin_N
EGF_LMN_ATRN
Pur_ac_phosph_N
GspH
Motif
Other DBs
NCBI-GeneID:
20217187
NCBI-ProteinID:
XP_009031846
JGI:
Helro1_91040
UniProt:
T1G7Z0
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MNTGLNQFIGRIQDFRFYDDALSNREIVQIHTGLLPISRIQSNCFCPASHTFEQGSSDPI
GCYRNNIDLNYSNLTNVNNLDPIRVQRISPLSHPIEMLNDGNPNTYFLTNPIDSLTVEID
FGDVFEVFFTKITFFSPLPVWLKIEKVSTDLNNNNNNWVTWQYYSRDCMRDFGLIPNGPL
DNATSFNCLTIDGSQPSSLSGASLIFNLLTSSRPGYQSPGNQLDLINHMMASRVRLTMSG
HEESLTLRHQYFGIYEVEVIGRCDCNGQASECNTSSLPYRCKCNDGTYTTGDKCDRCLPL
YNNKPFKRGSANQRSSCRACQCYDHASSCYYNSSIDLFSTNQNLGGGGVCLDCQDNTAGT
GCDWCAKNYYRPDGRSLLAKNVCEECNCNPIGSEKSADDDGFDCEKVGGQCKCKRNVEGR
QCDTCKPGFFNLQGSNPQGCEPCLCYPGGASPVGASSPGVDTCHPITGQCLCKENVQGLK
CDVCKFGFYGLSTQFSAGCQPCNCHPQRSLKSTCDVTSGRCSCRDGFGGLTCESCADGSY
LLGSCRACDCDPRGSTPGTQCNKLTGACTCQPNVIGNACNTCMENTFNLSSSGCRPCTCD
LYGVIDLHNTCDVITGNCTCKEGVYGPKCDSCKPFYYNFRRAPEIGSISGYGSGGCQPCP
CDVSGTISCNDVTGACLCKQNRSGERCDRCITSSSSMTSPMTPPTCLPCNCNLAGTILNT
ACDPLTGQCQCKMAGSGVGGLACDTCLPMFWGFSTTSGECQPCKCEPAGSQDNECNVGTG
QCKCKRLTSGRRCDVCVDGASDLSASNPDGCVQVPGQMLPVSVMDSGPTYFTLSWLPPRE
ANGILIGYKLFRDGLMIYNGTNNDTVYNDTGLEPYTKYSYRISVENNVGTTSSPSLTFQT
GQSTPSGNFTFKVTNIKSRSARVTWSPPSKNNGVIRKYVVRISEMVYNNNNNNNNRLDLE
TNLTQLKPYTKVTIQVQCCTIIGCLSSQSEQTIVTLEEAPANQDAPSVTALNATALLVSW
SPPNNPNGIIIFYELWLRSPTTTNNNNNATTTTYSEPRMIFNPSGQYDPLIVPSGTSSLP
PPRTNFTAVNLAPFSNYEFKVVSENSFGRCESVWNGGYTKEDAPTFVSAPNVTMATKSQL
QLTWSDQSSKINGVVRSRAICHVVGYVIDISGSDSWKVGICANLSSTTYTYNLTNLPPYS
NISFYMALCNSVGCSNSQVTWSVTSLAAPDKLKSPVVIPLNSTSLKITWTPPAVLNGPQP
NYVIRRSQPAFSNTPVPVERGNTTVSFDGIGYYKFDANVVPQGVAYTG
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaggtctcaatcagttcatcggcagaatccaagactttagattttacgacgac
gctctctcgaatagagaaatagttcagatccacacaggcctcctgccaatatctcgcatc
caatcaaattgcttctgccctgctagtcacacctttgagcagggatccagcgatcctatt
ggctgctacagaaataacatcgacctaaattattccaacctcactaacgtaaacaacctt
gacccaattagagttcaaaggattagtcctctgagccatccaatagaaatgctcaatgat
ggtaacccaaatacatatttcctcacaaatcctatagactctctaactgtagagatagat
tttggagacgtttttgaagtttttttcacaaaaatcacattcttcagtccgctgcctgtc
tggctaaaaatagaaaaagtttcaactgacctgaataataataataataattgggtcacg
tggcagtattactcacgtgactgcatgagggatttcggcctgattccaaatgggccgctg
gacaatgcgacatccttcaactgtttgactatagacggatcacaaccatcatcgctgtcc
ggggcctcattaatattcaacctcctgacgtcatcgcgacccgggtaccaaagccccggc
aaccaacttgacctaattaatcacatgatggcctccagggtcaggctaactatgtcgggt
cacgaggaaagtttaaccctgaggcaccagtacttcgggatttacgaggtggaagttatc
ggcaggtgcgattgcaacgggcaggcgtcggaatgcaatacatcctcactcccatataga
tgcaaatgtaatgatgggacttacaccactggcgataagtgcgaccgctgcttgccatta
tacaacaacaaaccatttaaacgaggatcagccaatcagagatcgtcgtgccgcgcctgt
caatgctatgaccacgcctcctcctgttattacaactcttccatcgatctcttcagcacc
aatcagaatttaggagggggaggagtttgcctcgattgccaagacaacaccgccggaacg
ggctgtgattggtgcgctaaaaattactacagacccgatggtagaagcttattggctaaa
aatgtttgcgaggaatgtaactgcaatcctattggctctgaaaaaagtgcagatgatgat
ggattcgattgcgaaaaggtaggcggacagtgcaaatgcaaaagaaatgttgaagggagg
cagtgtgacacctgcaaacctggtttcttcaatttgcagggctcaaacccccagggctgt
gaaccatgcttgtgttatccgggtggggcaagccctgtaggggcctccagtcctggggtc
gatacatgccacccaatcaccgggcagtgtctttgtaaagagaatgttcaaggtttaaaa
tgcgatgtctgcaagttcggcttctacggactctccactcaattttcggctggctgccag
ccgtgcaactgccatccgcaaaggtcactcaagtccacctgtgacgtcacttccggccgg
tgctcctgcagagatggattcggcggtctgacgtgtgagtcctgtgctgacggttcctac
ctgctgggttcctgcagagcatgtgattgcgacccgcgtggatcgaccccaggtacccag
tgcaacaaactgacgggggcctgcacctgccagccaaacgtcatcggcaatgcctgcaac
acttgcatggaaaacactttcaacctttcatccagtggatgtcggccttgcacatgtgac
ctctacggtgtcattgaccttcacaacacctgtgacgtcataaccggaaactgcacgtgc
aaagaaggtgtttatggtccgaaatgcgacagctgcaaacctttctactacaacttccga
cgtgcaccggaaatcggaagtataagcggatacggaagtggcggttgccagccgtgtccg
tgtgatgtttctggaactatttcctgtaatgatgtgactggcgcgtgcctttgtaagcag
aatcgatccggggagagatgtgaccgatgcattacatcatcatcgtcaatgacgtcgccg
atgacgccaccaacatgtctgccgtgcaactgcaacctcgccgggacgatcctgaacact
gcatgcgaccctctgaccggccagtgccagtgcaagatggccggaagtggagttggagga
ttggcgtgcgacacctgtctgcccatgttctggggttttagcaccacttccggagaatgt
cagccatgcaagtgcgagccagcgggcagtcaggacaacgagtgtaacgtcggcacgggt
cagtgcaaatgtaaaaggctgacgtctggcaggcgatgcgacgtttgtgtggatggagcc
tctgacctttcggcttccaacccggacggctgtgttcaagtgccgggacaaatgctaccg
gtctcggtgatggactccggcccgacatacttcacgttgtcatggttaccgcctcgcgaa
gcgaatggaattctgattggatacaagttgttcagggatggcctgatgatctacaacggg
acgaataacgatacggtttacaatgataccggcttagaaccgtacacgaaatattcgtac
cggatatcggtggagaacaacgtcggcacaacatcaagcccatctctaacttttcaaact
ggccaatcgacgccgagcggtaacttcaccttcaaagtgaccaacataaaatctaggtca
gctcgagtcacatggtcaccgccgtcgaaaaataatggggtcatccggaagtacgttgtc
aggatttcagagatggtctataacaacaataacaacaacaataacaggcttgacctagaa
acgaacctgacacagttaaaaccctacacgaaagtaacgatacaggtgcaatgctgcacg
atcattggttgcctctctagccaatcagagcagaccattgtgacgttagaggaggctccg
gccaatcaagatgctccgtccgtcactgccctgaatgcaacggccctattggtcagttgg
tcacctccaaataacccaaatggtatcatcatattttacgagttgtggctacgatctcca
acaacaaccaacaacaacaacaacgcaacaacaacaacatacagtgagcctagaatgata
ttcaacccatccggccaatacgatcctttgatagttccatctggaacctcgtcgttacct
ccacctcgaactaatttcactgccgttaatttggcccctttcagtaattacgaattcaaa
gtagtcagcgagaactcgttcggaagatgtgaaagtgtctggaatgggggctatactaaa
gaagatgcgccaacttttgtctccgctcccaacgtaaccatggcaaccaagagccaactg
cagttaacctggtcagatcagagttcaaagattaacggcgtcgttaggtcacgtgctatt
tgccacgtggttggctacgtcatcgatatctcaggctctgattcgtggaaggttggtatt
tgtgccaacctgtcatcaaccacctacacgtacaacctcaccaacctgcccccctactcc
aatatctccttctacatggccctctgcaattccgtcggctgctctaacagccaagtcacg
tggtctgtgacgtcactggccgcgccagataaactgaaatctccagttgtaatcccactg
aacagcacatccctaaaaattacctggaccccaccggccgttttgaacgggcctcagcct
aattacgtaatccggagatctcaaccggcatttagtaatactccagtgccagttgaaagg
ggtaataccacggtgtcctttgacggtattgggtactataagtttgatgccaatgtcgta
ccgcagggtgttgcttatactggttag
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