Helobdella robusta: HELRODRAFT_91231
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Entry
HELRODRAFT_91231 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
hro
Helobdella robusta
Pathway
hro03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HELRODRAFT_91231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_91231
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HELRODRAFT_91231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Vps39_1
Motif
Other DBs
NCBI-GeneID:
20217211
NCBI-ProteinID:
XP_009031989
JGI:
Helro1_91231
UniProt:
T1G814
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MSTGFDDLLNQTHKLRAEMEIGEDFPRIERNLVQIRDAAFKMATKTPSFNAEKTDIKAAL
LLSSRGYDVSKSTQKLESLNRTKTFEPLEPIKDVDIQAFLKNEYENAVLTAVEHTKKKTF
EEATEAHWEMHEREWEKEKRKIMNSLVDLADENLDFSTVSEQSFSRTMPMDVSCRKVEEQ
MGDNVIYFVQIQQYNESSMKADARNVLLDAIKKLDDQNLQETWWMVDSLSSITGTSTNKF
SSSHRSSPSYQSSLIRQSLSHLEKTNVKQMERLVSMNLQYAQRGGIPGTYNLIKSLFNIK
FGAGGRGASYENDLIDGYPAWAFVYHCLRSGDKAAINQVINKSRNVIGDFANYLTEYTSS
DDRRLSAGSEREVRLQYRRTISSSKDPYKRIVYCVVGRCDCNDDHADVATTTDDYLWLKL
SQVVVALDSNDFSNTVDTLSLGQLQIMLFETYGENHFNASQDPLLYFRILMLVGLFEAAI
EFLSRFDVYRDVSVHIAIVMNACNLLLLPANVNSHLLTRDQSDGHPIRRLNFARLIMLYA
SKFERSNPIKAVHYYYLLNDLTNQEGDNLFDSCISEVVINTREYDLLLGQLQLDGSRKPG
LLDQLNVNVNKIIEKVAKELESTGQLNDAVILYDLCKNQTKVIDLLNKLLSQIISSPTRR
SSDNIKKIAISVAERLQGSGTASIPNVATFHLLLDLMTFFSYYYENCIEDAYNVIKELKI
ISLTEDSLEDRLKNVGTLSDEVRRCLPNVLLATATIITQLFNRVIGPIVNDPATSNNLLR
RYRYEMHCLVSFCGSMPYRMPADVTARLVQFEASIK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccggttttgatgatttgttgaatcagacgcacaaacttagggcggaaatggag
attggggaggattttccgagaatcgaaagaaatttagttcaaatccgtgatgccgccttt
aaaatggccacgaagaccccgtcatttaacgcagaaaaaactgacatcaaagcggccttg
ttactgagttcccgtggttatgatgtcagcaaatctactcaaaagttggaaagtctgaac
aggacaaaaacttttgaacctctggaaccgataaaagatgtcgacatacaggctttttta
aaaaatgaatacgagaatgcagttctaacagcagtcgaacatacaaagaaaaaaacattt
gaggaggccactgaagcgcattgggagatgcacgagagagagtgggagaaggagaaaaga
aaaattatgaactctctggtagatttggcagatgaaaatctagatttttccaccgtttca
gagcagtcatttagtaggacaatgcccatggatgttagttgcagaaaagtggaggagcag
atgggtgataacgttatctatttcgtgcagatacagcagtacaacgagtcttccatgaaa
gccgatgcgaggaatgttttactggatgccattaaaaaactcgatgatcagaacctgcaa
gaaacatggtggatggtggatagcctgtcaagcattacgggcacatcaaccaataaattc
tcttcctctcacagatcctcaccatcttaccagtcgtctctcattcgccagtctctctct
caccttgaaaaaactaacgtcaaacagatggaacgtttggtgtcgatgaacttgcaatat
gctcagaggggaggaatacctggcacctacaacctcatcaagagtttgttcaacattaag
ttcggtgccggtggacgtggtgctagctatgagaatgatttgattgatggctatcctgcc
tgggcctttgtgtatcactgtttgagatctggcgataaggcagctatcaatcaagttatc
aataaatcaagaaacgtcattggcgattttgcaaactacctcacagagtacacctcatca
gatgatagaagattgtcggctggctctgaaagagaagtgagattgcagtataggagaacc
atttcctcatctaaggacccatataagagaattgtgtactgtgtagtaggcagatgcgac
tgtaatgacgatcacgccgatgtagcgacgacaacggatgattacctgtggctgaaactt
tcacaagttgtcgtcgctctcgacagtaacgacttctcaaacaccgttgatactttatca
ctgggccagctacagatcatgttgtttgagacttatggagaaaaccacttcaacgccagt
caggacccgttactctacttccgtattctcatgctagttggtctcttcgaggcagccatt
gagtttctatcgagattcgacgtctaccgggatgtgtccgttcacattgccatcgtcatg
aatgcctgcaacctcctgctgttgcctgctaatgtcaattcccatctcttaacgagagac
caatcagacggccacccaatcagacgactgaatttcgcgcgactaatcatgctgtacgct
tcaaaatttgaacgctccaacccaatcaaagccgtccattattattacctcctgaacgat
ctgaccaatcaggaaggagataatttgttcgactcgtgcatcagtgaagttgtcatcaac
accagagagtatgatcttctgctgggccagttgcagttggatggttcaaggaagccgggg
ctacttgatcagttgaatgtcaatgtcaacaaaattatcgaaaaggttgctaaagagctt
gagagtactggtcagttgaatgatgcggtcatcttgtatgatctttgcaagaaccagaca
aaagtgatcgacctgttgaacaaattactgtctcaaattatatcatctcctactagacgg
tcaagtgacaacatcaaaaaaattgccatctctgtagctgagaggttgcagggctccggt
acggcatccattcctaacgtagcaacgttccacttgcttcttgacctcatgacgtttttc
agttactactacgaaaattgcattgaagatgcttacaatgtgataaaggagttgaagata
atatccctgaccgaagactcattagaggatagactgaagaacgtggggaccttgtcagat
gaggttaggaggtgtcttcctaatgtactgctggccactgccaccataattacccagctg
ttcaatcgagtcatcggtcccatcgttaacgaccctgccaccagtaacaatcttctgagg
aggtacagatacgagatgcattgtctggtgtccttttgtggctccatgccctacagaatg
cccgccgacgtcactgccagactggttcagttcgaagcgtcaatcaaatga
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