KEGG   Helobdella robusta: HELRODRAFT_91608
Entry
HELRODRAFT_91608  CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
hro  Helobdella robusta
Pathway
hro03020  RNA polymerase
hro03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HELRODRAFT_91608
  09124 Replication and repair
   03420 Nucleotide excision repair
    HELRODRAFT_91608
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hro03021]
    HELRODRAFT_91608
   03400 DNA repair and recombination proteins [BR:hro03400]
    HELRODRAFT_91608
Transcription machinery [BR:hro03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     HELRODRAFT_91608
DNA repair and recombination proteins [BR:hro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      HELRODRAFT_91608
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 DUF7380
Other DBs
NCBI-GeneID: 20217257
NCBI-ProteinID: XP_009010684
JGI: Helro1_91608
UniProt: T1G860
LinkDB
Position
Unknown
AA seq 140 aa
MATGGTSNEAEREDAAELIFPKEFENAETLLISEVQMLLDHRKTQNENAEDEQELSHVFM
KTLTYTERFSKFRNRETIAAVRSLLMQNKFHKFELATLANLCPESADEAKSYIPSLEGRF
EDDELQQILDDIKTKRSFQY
NT seq 423 nt   +upstreamnt  +downstreamnt
atggctactggtggaacaagtaatgaagcagagagagaagatgctgctgagttgattttt
cctaaagaatttgaaaatgctgaaacacttttaatatctgaagttcagatgttgcttgat
catagaaaaactcaaaatgagaatgcggaggatgagcaggaattgtcacatgtattcatg
aagactctaacatacactgaaagattttccaagttcagaaatcgagaaacaattgcagcc
gttagaagtttattgatgcaaaataagtttcacaagtttgaactggcaaccctggctaac
ttgtgccctgaaagtgctgatgaggccaaatcatacattcccagtttggaaggaagattc
gaagatgacgaattacaacaaattctagacgacatcaaaactaaacgaagtttccaatat
tga

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