Helobdella robusta: HELRODRAFT_93424
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Entry
HELRODRAFT_93424 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
hro
Helobdella robusta
Pathway
hro03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HELRODRAFT_93424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hro03021
]
HELRODRAFT_93424
03036 Chromosome and associated proteins [BR:
hro03036
]
HELRODRAFT_93424
Transcription machinery [BR:
hro03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
HELRODRAFT_93424
Coactivators
SAGA/TFTC/STAGA complex
HELRODRAFT_93424
Chromosome and associated proteins [BR:
hro03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
HELRODRAFT_93424
STAGA complex
HELRODRAFT_93424
TFTC complex
HELRODRAFT_93424
SAGA complex
HELRODRAFT_93424
SLIK complex
HELRODRAFT_93424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Bromo_TP
DUF5739
Histone
Motif
Other DBs
NCBI-GeneID:
20217505
NCBI-ProteinID:
XP_009009450
JGI:
Helro1_93424
UniProt:
T1G8V8
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MNSKVIMNGQSSEDEPNKMSGNNFVISNDSVKVISETVGISNLDETGLSILSERTTFVLK
LILGDSKQFMEKNNRLKLTSDDIDLAMRNRGIEPVFGFYTGEPIPFRMASGGSGREIFFD
DEKEVDLNDIISAPPPKVPLECTIKPHWLAIEGIQPLIPENPAPITKKVSSEQGTLNIIG
SQKAAESVLNKSKIKLNTVEKVRIKEVTTHELSIEQQLYLKEITEACVGSDENRRIEALN
SLMTDTGLFQMLPRLCNFISEGVRINTVQNNLALLIYLMRMTKSLVDNQSLSLEKYLHEL
IPPIFSCIISRQLCIRPDSDNHWALRDFAARLICQVCKNFNTSTNQLQSRITKMLSTTLQ
NESAPLATHYGAIICLGELGQEVVKAFVLPHLVQISEKLASVLENSLGMLIISNIDRIAA
EHIKTAVLKIVPPVLRQVKNSPDSVEEYKQDHGLYLGPLLHSAVLKLR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtaaagtgataatgaatggtcaaagcagcgaagatgaacctaataaaatgtcc
ggaaataatttcgtcatcagcaacgatagtgtaaaagttatttctgagactgtaggcatc
tccaatttagatgaaacaggactgagcattctatcagagaggactacatttgtccttaaa
ttaattcttggagacagcaaacaatttatggagaaaaataatcgactaaagttgacgtca
gatgatatagacttggcaatgaggaaccgagggatcgaaccagtatttggattttacaca
ggtgaaccaattccttttcggatggcaagtggtggatcaggtagagagattttcttcgat
gatgaaaaagaagtggatttaaatgatattatcagtgcccctcctccaaaagtaccactt
gaatgcactataaaacctcactggcttgccattgaaggcatccaaccattgattcctgaa
aatccagcccccatcacgaaaaaagtatcttccgaacaaggaacattgaacataattgga
agccaaaaagcagcagaaagtgtacttaataagagtaaaattaaattgaatactgtagaa
aaggttcgtataaaagaagtgacaactcacgaactatccatagaacaacagctttacctc
aaagaaataacagaagcttgtgtgggctccgatgaaaaccggcgcatagaggcacttaac
agtttaatgacagacaccggtctatttcaaatgctacctcgattgtgtaacttcatttca
gagggtgtacgaattaacactgtacaaaacaatcttgcattgcttatttatttaatgaga
atgacaaaatcacttgtagataaccaaagtttgtcattagaaaaataccttcatgaactc
atacctcctatattttcttgtattataagtcgacagctatgcatccgtcctgacagtgac
aaccactgggctttgagagattttgctgcaagacttatttgccaagtgtgtaaaaatttc
aatacaagcactaaccaacttcaaagtcgaataacgaaaatgttgtcaactactcttcaa
aatgaaagtgctccactggctactcattatggggccataatatgtttaggagagttgggt
caggaggttgtgaaagcttttgtacttcctcatttagttcaaatttctgaaaaattggca
tctgtcttggagaactccttaggaatgctaataatttcaaacatagatagaatagcagct
gagcatatcaagacagctgtccttaaaattgttcctccagtgcttcgtcaggtaaaaaat
tctcctgatagtgtagaggaatataaacaagatcatggtttgtacttggggccgttatta
cattccgctgttttgaaactacga
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