Helobdella robusta: HELRODRAFT_94015
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Entry
HELRODRAFT_94015 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K12816
pre-mRNA-processing factor 17
Organism
hro
Helobdella robusta
Pathway
hro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HELRODRAFT_94015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_94015
Spliceosome [BR:
hro03041
]
Complex C
Other components
Step II factors
HELRODRAFT_94015
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_TEP1_C
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
WD_LRWD1
PQQ_2
Motif
Other DBs
NCBI-GeneID:
20217532
NCBI-ProteinID:
XP_009015656
JGI:
Helro1_94015
UniProt:
T1G8Y5
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MALELIKSGYDDDSGAESDPNDEVNFHFKAPADTEGKKPKRLVCSAPPVASSNLSDIKPI
NPETKVLFYNPKYEELYAPEVGPENPFKTNQMKAHRNMLTGFVEECHVNDFQFENQRRTF
TSYGYAINPSVTDEDAASGSHIGDIEKGEKSNFKTVYETTKKREGDKRKRLRNDDPSDVD
GYLGPWGKYVDEVTVAKPTEEEKKELDEYLSKQNKRSKKIELKPTEEKSILHLKEACDYQ
GRTFMCEPHDVGVNLKSREPPQKCFLPKKLLYTWTGHNKGVAAVRWFPHTAHLMLTCSMD
AKVKLWEVYNNRRCVRTYIGHKEAVRDICFDNHGTKFLSCGYDRFSKLWDTETGQCISRF
TNGKVPYCIKFHPEENMQNYFVAGTKDKKIVCWDVRSGEITQEYDRHLGAVNTITFVDQN
RRFVSTSDDKSLRVWEWNIPVDFKYIADPSMHSMPAVTPSPNGKWLACQSMDNQIVIFNA
INRFKFMRKKVFKGHMVAGYSCGVDFSPEMSYLISGDGDGKLYIWDWKTTKLYTKFQAHD
GVCSSCLWHPHETSKVVTTGWDGLIKLWD
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggctttggaattaataaaaagtggatacgacgatgacagtggcgcagaatccgatcca
aacgacgaggtgaactttcacttcaaagcacccgctgataccgaaggcaaaaagcctaag
agactcgtctgctcggccccacctgttgcttcatcgaatttgtcagacatcaaaccaatc
aacccagaaacaaaagttctcttttataatccaaaatatgaagaattgtatgcaccagag
gttggtccagagaacccattcaaaactaatcaaatgaaagctcacaggaacatgctgacc
ggttttgttgaagaatgccatgtgaatgatttccaatttgaaaatcaacgacgcacattt
acaagttatggttacgctatcaatccgtcagtaaccgatgaggatgcagcgtcaggttca
cacattggagacatcgagaagggagagaaaagtaacttcaaaaccgtctacgaaacgacg
aagaagcgagaaggtgataaacgaaagaggttaagaaatgatgacccgagtgatgttgat
gggtatctggggccatggggcaagtacgttgatgaagttactgtggccaaaccaactgaa
gaagaaaaaaaagaattggatgaatatttaagcaagcagaacaaacgatcgaagaagatt
gaattgaaaccaacagaagagaaatcaatattgcacttgaaagaggcatgtgattaccaa
ggccgaacattcatgtgcgagccacacgatgtcggagtcaacctcaaaagtagggaacca
cctcagaagtgctttctaccaaagaaattactctacacgtggactggccataataaaggt
gtggcagctgtcaggtggtttcctcacacagcccatctcatgctcacctgtagtatggat
gccaaagtcaagttatgggaggtgtacaacaatagaagatgtgtgcgaacgtacattgga
cacaaggaagccgttcgagatatctgcttcgataatcatgggaccaaattcctcagctgt
ggttatgatcggttctcgaaactgtgggacacggagacggggcagtgcatcagtcgattc
actaatggaaaagtaccttactgtataaaatttcatcctgaggagaacatgcagaactat
tttgttgcaggcactaaggacaagaagatcgtctgctgggatgtgaggtctggagagata
actcaggagtatgacaggcatttgggtgctgtcaacaccatcactttcgtcgaccagaat
agaagatttgtatctacctctgatgataaaagtctccgagtttgggaatggaatattccg
gtagacttcaaatacatagctgatccgtccatgcattccatgccagctgtcactccatca
cccaatggaaaatggttggcatgtcagtcgatggacaatcagatcgtcatattcaatgcc
atcaaccgattcaaattcatgaggaagaaagttttcaagggtcacatggtcgctggttac
tcgtgtggagtcgacttctctccagagatgagttacttaatatctggagacggggacgga
aagttgtacatttgggattggaagacaacaaagttgtacacaaagtttcaagcgcatgat
ggcgtctgttccagctgtctttggcatccacacgaaacttccaaagtcgtcacaacgggt
tgggatggactgatcaaattatgggactaa
DBGET
integrated database retrieval system