Helobdella robusta: HELRODRAFT_94426
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Entry
HELRODRAFT_94426 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K13218
polypyrimidine tract-binding protein 1
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_94426
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_94426
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
HELRODRAFT_94426
Spliceosome [BR:
hro03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
HELRODRAFT_94426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Fungal_TACC
Motif
Other DBs
NCBI-GeneID:
20217559
NCBI-ProteinID:
XP_009019582
JGI:
Helro1_94426
UniProt:
T1G912
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MKRSSDNQTSMYSSNGNSQTMDYNNKKLKMEVNVNKPSRVVHLRGVPNDVSDVEIVQLAL
SFGRISNLVVSKKKNQALVEMMDIAAAQAMVQYYGEHPPSIRKRVVHVQFSTYEKLKTEN
TRFQDDMSNLTDQLVLGMDENRTVLRVIIDNMLYPVTVDILKLIFSKYGQVLRIVTYNKN
NSFQALIEYADGISAKSGLTALNGQNIYNGCCTLRIDYSHLETLQVKYNNEKTYDYTDPN
LPSGPMASVGEQMGILDTPHGDGILGSYSGNFGGLGGSLGGIGGNFSNISKLGAMPAGLT
GFSAGGLGNFGGGGLGGIGGLAGLGSMLGGVGAGLAGAGGMMMGGNNQSTGHSVLIISNL
NEEKVNTDYLFTLFGMYGMVTRVKIMYNKKDTALVQFSDPALALNAVNCLDKLKWYGKVM
KVSVSKHNYIQMPKEGQADEGLTKDYTNSKLHRHANPGSKKYGAINPPSAVLHITNIPQS
MTEDELRDLFGKCGHVVGFRFLENEKKMALLKMETIEDAVAALVELHNYQLPGPQYLRVS
FTKSNL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgttcatctgacaatcaaacttctatgtattcttcgaatgggaattcacaaact
atggattacaacaacaaaaaattgaaaatggaggtgaatgtaaataagccgagccgtgtt
gtacatttacgaggagtgccgaatgatgtcagtgacgtggaaattgttcaattggcgctg
tcgtttggtaggatttctaatctagttgtgtcaaagaaaaaaaatcaggcactagtggag
atgatggatattgctgctgcccaggcaatggtgcagtattacggtgaacatcctccatct
ataaggaaaagagttgttcatgttcagttttccacctatgaaaagttgaaaactgagaat
acaagatttcaagatgacatgagtaatctgactgatcagctggtcttgggcatggatgag
aacaggactgtgcttagagttatcattgacaacatgctttatcctgtaactgttgatatc
cttaaattgattttttcaaagtatggtcaagttttgagaattgtgacgtacaataaaaac
aactcctttcaagcgcttattgaatatgctgatggtatttcagccaaatcaggattaaca
gctttaaatggtcaaaacatctacaacggatgttgtacactgaggattgactattcacat
ttggagacactccaagtcaaatacaacaatgaaaagacctatgactacacggatcccaat
ttgccttctggtcccatggctagtgttggagagcagatgggcatattggacactccacat
ggagatggaatattaggatcatatagcggaaactttggaggtttgggcggctcccttggt
ggcattgggggaaatttttcaaatatttccaaacttggagccatgcctgcaggactgact
ggtttttctgccggaggattgggaaattttggtggtggaggtttgggtggaataggaggt
cttgctggtttgggtagtatgttgggaggtgttggtgctggtctggctggtgcaggtggt
atgatgatgggaggcaacaaccaaagtacgggacacagtgttcttattatatctaatctc
aatgaggagaaagtcaatacagattatctattcaccctttttggaatgtatggtatggtg
accagagtgaagatcatgtacaataagaaggacacagcgttagttcaattcagtgaccct
gctcttgcattgaatgctgttaactgtcttgacaaattgaagtggtacggtaaagtgatg
aaagtttcagtgtcaaagcacaactacatccaaatgcccaaagagggacaggcggatgag
ggtctgacaaaggattataccaactctaaactgcacagacatgctaatccaggatccaag
aaatacggagcaatcaatccaccctctgctgtgttacacattactaatatacctcaatct
atgactgaagatgaattgagagatttgtttggcaaatgtggacatgttgtgggttttaga
tttcttgaaaatgaaaaaaagatggcactgttaaagatggaaaccattgaagacgccgta
gctgcacttgtggaattgcacaactatcaacttccaggaccccagtacctgagggtgtct
ttcaccaaatctaatttataa
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