Helobdella robusta: HELRODRAFT_96652
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Entry
HELRODRAFT_96652 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K13143
integrator complex subunit 6
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_96652
Spliceosome [BR:
hro03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
HELRODRAFT_96652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INT_SG_DDX_CT_C
VWA_2
Motif
Other DBs
NCBI-GeneID:
20217677
NCBI-ProteinID:
XP_009031579
JGI:
Helro1_96652
UniProt:
T1G9D0
LinkDB
All DBs
Position
Unknown
AA seq
1013 aa
AA seq
DB search
MTIIVFLVDTSCSMNQRTYAGTTFLDTAKNAVEMFMKIRSRDPNCRWDRYMLLTFEEPPM
NVKAGWKESHATFMKELKNLEAHCLTTLGPALKHTFDMLNTNRMQSGIDTYGQGRCPFFL
EPAVIICLTDGKKMTSLTGASNELNLPMNVACLPGSELTKEPFRWDQRLYGIVFKMSATP
IQDNLTYIPSDDSSIDAMCEVTGGRSYAVATQKMLMQCLESLVQKCQSGVVVNFEKLPSE
PHSNNNNNNNNNDSNNNNGGSGKSQNSPQNQPWHNCKRLIYVPRSAQRGGTVGHWPIPEA
YWPDASRDVLPPRTAHPIINFSCQPCEPITLENLPFDKYEMEPSPLTQYILERRQPHVVW
QVYMQNSCNKYSTSDIGYPFGYIKASTTLNAVNLFVMPYNYAVLVPLLDELIKVLKYKPT
IKWKMQFDAYLKTVPAYYANPLKRAFSRMSLPPTLNLIPDQMDNCLSYSVVLHLKKIKNQ
AKLEYDRLVASVGQYPTHCPTIRVLPSRPPTPRLASSLSSSTSSSAQRGDFKHLIIQYSA
GNACGPKQGLLSSHNNMNNNNNNNMNNNNLGVDSFEVFNLHAIQKIVDTHIYTNPYDIHR
SDLLLNLAKMRMNLLKSHNHALSTKFQNMDAIHNSPIQEMGNYQDYLKRQQPPLREIETT
PTRVHTFGNPFKVKNMMIDEADEAMPGQSSSSSSSSSARKRSLSESSTSSSTSSSSSLSK
ANKKRGPIPRSYTLRTFLSSLSSSPPPPPSSPSLPSSLTPCPPTPIPSSDPVKSGSDDAN
RSNDVTMTSDENEPCIDLKVGSSEQTSLAGQSSDHSKLRKKNKNKNINNNKNKNNSNNNN
NSMTTNNKNDLSIINNNVENIKMTNGIDVLVSQNHINNNSSNIADDISLDNSSNDAINNG
VTDDDDFEVASSVLELLNSKKSILNGNVDTASFNSEIKKLIVTEVKKPGKKYTIIFNLLR
CLRGDTSEKRSQIEKVISEASRFKKYALVRILEEYCNNNNRNNYSNSIRNNFL
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcatagtttttcttgtggacacaagttgctccatgaatcagcgaacttacgct
gggaccacctttttagatactgccaaaaacgccgttgagatgtttatgaagataagatca
agagatccgaactgccgatgggaccgatacatgctcctaactttcgaggaaccgcccatg
aacgtaaaggccggatggaaagaaagtcatgccacattcatgaaagaattaaaaaacttg
gaggcacattgtttaacaacgcttggccctgcactcaaacacacatttgacatgttaaac
accaacagaatgcagtctgggatagatacatatggccaaggtcgttgtccttttttcttg
gagccggcagtcatcatctgcctgacagatggtaaaaagatgacctcattaactggtgct
tctaatgagctaaaccttccgatgaatgtcgcttgtttgcccggatccgagctaacgaag
gaaccgtttcgctgggaccagcgattgtacggtatcgtatttaaaatgtccgccacacca
attcaggataacctaacttacattccctccgatgactccagtatcgatgcaatgtgtgaa
gttactggaggtcggtcgtacgcggttgcaacgcagaagatgctgatgcagtgcttggag
tccctcgtgcagaagtgccagagtggggttgtcgttaatttcgaaaaactgccctctgaa
ccccacagcaacaacaataataataacaacaacaatgattccaacaacaacaatggcgga
agtggaaagtctcagaattcgccacagaaccaaccatggcacaactgcaagcgactaatt
tacgtaccccgatcagctcagagaggtggaactgttgggcactggcctatacctgaagcc
tattggcctgatgcttctagggatgtgctgcccccgaggacagcccacccaataataaat
ttttcctgccaaccatgtgaaccaatcacattggagaatcttccattcgacaaatacgag
atggagccatcgccactgacgcagtacattctggaaagaaggcagccacatgtcgtttgg
caggtctacatgcagaacagttgcaacaaatactcaacgtcagatataggatatccattc
ggttacataaaagccagcacgactcttaatgctgtcaacctattcgttatgccttacaac
tacgccgttctagtaccattgcttgacgaactgataaaagtgttaaagtacaagccaaca
ataaagtggaagatgcaatttgatgcctacctcaaaactgtcccggcctattatgctaat
ccgttgaaacgtgcgttcagtcggatgtccctgcccccaacactgaacttaatacctgat
cagatggacaactgcctcagttactccgtggtacttcaccttaagaagattaagaaccaa
gcaaaattagaatatgacagattagtagcatcagtcggccagtacccaacccactgcccc
accattcgggtcttgccctctaggcccccaaccccacgtctcgcatcatcattatcatca
tcgacatcgtcgtcagctcagcgcggcgacttcaagcatttgattattcagtattctgct
ggaaatgcttgcgggccgaagcagggcttgctttcatcccacaataatatgaataacaat
aataataataatatgaataataataatttgggagttgatagttttgaagttttcaatcta
cacgccattcaaaagatagttgatacgcacatatacacaaacccgtacgacatacacagg
tccgacttgctgttgaaccttgccaagatgagaatgaatcttctgaagtctcacaaccat
gccctctcaactaagtttcagaacatggatgccatccacaactcaccgatccaagagatg
ggcaactaccaggactacctgaagcgacaacagcctcccctgagagagatcgagaccacg
cccaccagggttcacacgtttggcaaccccttcaaagtcaagaacatgatgatagatgaa
gccgatgaagcgatgcccgggcagtcgtcgtcgtcatcttcgtcgtcatccgcccggaaa
aggagtttatccgaatcatctacgtcatcgtcgacgtcatcatcgtcctctttatcgaaa
gccaataaaaagcgaggacctataccaagaagttacacccttcgaactttcctctcctca
ctatcatcatcaccaccgccaccaccatcatcaccatcattaccctcttctctgacacct
tgcccgccgacgcccattccatcgtctgacccagtcaaatctgggtcagacgacgcaaat
aggtcaaatgacgtcacgatgacgtcagacgagaatgagccatgtatagatttgaaggtt
ggtagcagcgagcaaacatcgctcgctgggcaatcttcagatcattcaaaattacgtaaa
aagaataagaacaaaaacatcaacaacaacaaaaacaaaaacaacagcaacaacaacaac
aacagcatgacgactaataacaaaaatgacctcagtatcatcaacaataacgtcgaaaac
atcaaaatgacaaacggtattgatgttctagtctcgcagaatcacatcaacaacaacagc
agcaacatcgcagacgacatcagcttagacaacagcagcaatgacgccatcaataatggc
gtcaccgacgatgacgatttcgaagtagccagtagcgttctagaacttttaaattctaaa
aagtccattcttaatggcaatgtcgatactgcaagcttcaacagtgaaattaagaaactc
atcgtaaccgaagttaagaaaccggggaaaaaatacactataattttcaacctccttcga
tgtctgcgtggggacacctcagaaaaaagatcacaaatagaaaaggtaataagcgaggcc
agccgatttaaaaagtatgctctggtcaggattttggaagaatattgcaacaacaacaac
cgtaataactacagcaatagtattaggaacaattttttgtag
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