Helobdella robusta: HELRODRAFT_97791
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Entry
HELRODRAFT_97791 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
hro
Helobdella robusta
Pathway
hro03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HELRODRAFT_97791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hro03021
]
HELRODRAFT_97791
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_97791
Transcription machinery [BR:
hro03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
HELRODRAFT_97791
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
HELRODRAFT_97791
U7-dependent histone pre-mRNA processing factors
HELRODRAFT_97791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
Motif
Other DBs
NCBI-GeneID:
20217737
NCBI-ProteinID:
XP_009012872
JGI:
Helro1_97791
UniProt:
T1G9J0
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MLTPPIIQALKEYCISENQIYLGMTILKEMIVKRPCVKFQVLDVLLDLTVHEKTELRQNA
IRTAKNLYEKADLKDRIEERALMRLKALLMPTPPPDLIKLDATTNNATNQWTEESIRLSL
YLYLTLLPSEHQLIHQLASIYTASSSEIKRTILRVLEGPVKGMGMDSPELLLLVENCPKG
AETLVTRVIHILTDKAMPSVELVDRVRDLYNKRVSDVRFLIPVLNGLSKSEVVTALPRLI
KLNPVVVKEVFNRLLGVNGQENMGNSLNPIELLVTLHTLDSNKVDMKTIIKACNLCFAER
SVYTQDTLALVIQQLLDLNPLPTLIMRTVIQALATYPRLTGFVINIMQRLLTKQVWKNKK
VWEGFVRCCQRTKPQSFQILLQLQPAQLKDSFTICPDLREALLSHIMSFNPHQRAHIPKS
VMSLIEKPLEKPTVVTLSTQPNVNSDVEAKKFVSEDSVGGASGLEIKDEQAVNLNADDHQ
KVAEDSSSSSDVTKQTSPLISITLQKMAEGPKLVPEENLESCGDGKEDTPEIVSPTKL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgctgactccaccaatcatacaagccctcaaggagtactgcatcagtgagaatcagata
taccttggtatgacgatattaaaggagatgattgttaagaggccgtgtgtgaagtttcaa
gttctcgacgttctgcttgatttgactgtccatgagaaaactgagctgagacaaaacgcc
ataagaacagcaaagaacctctatgagaaagctgatcttaaggatcgaattgaagagaga
gcattgatgaggctgaaagcgctactaatgcccactcctcccccggatctcataaaattg
gatgccaccactaacaacgcaactaaccaatggactgaagaatcaatccgcctctcgctt
tatctctatctcaccttacttccttccgagcatcaactcatccatcagctagccagcatc
tatactgcatccagtagtgagataaagaggactattttgagagtgttggagggacctgtg
aaaggcatgggtatggattcaccagaactcttgctattggttgaaaactgtccgaagggg
gcggagacattagtgaccagagtcattcatatactcactgataaggccatgccgtcagta
gaattagtggatagagtgagagatttgtacaataaaagagtatcagatgtcaggttcctt
atacctgtcctcaacggtttatccaagagtgaagtagtaacagcactaccaagactgatc
aaactcaaccccgttgtagtcaaagaagtgtttaatcgtctgctgggagttaatggccaa
gagaacatgggaaattccctgaacccaattgaactcttggtgaccttacatacgctggat
tccaataaggtcgatatgaaaactatcatcaaagcatgcaacctatgcttcgctgaacgc
tctgtctacacccaagacaccttagccctggtcatccagcagctcctggatttgaacccc
ctaccgacgcttatcatgaggacggtcattcaggccctggctacttaccccaggctaact
ggtttcgttatcaatatcatgcaaaggttgctaactaaacaggtttggaagaacaagaaa
gtttgggagggctttgtgaggtgctgccagaggaccaagcctcagtcgtttcagatcctc
ctacagctgcaaccagctcaactgaaagactccttcaccatctgcccagatcttcgagag
gccctcctcagtcacatcatgtcatttaatcctcaccagcgagcgcacatccctaaatca
gtgatgtcactcattgaaaaacccttagaaaaacccaccgtcgttaccttatctacacaa
cctaatgttaatagtgatgtcgaagctaagaaatttgttagtgaagatagtgttggtggt
gccagtggcctagagatcaaagacgaacaagcggtcaatttgaacgccgatgatcatcag
aaagttgcggaagatagcagtagtagcagtgatgttactaagcagaccagtcctttgatc
agtataacattacagaaaatggcggaaggtcccaagttggtgccagaagagaacctggag
tcctgtggtgatggaaaagaagacactccggagattgtgtcaccaacaaagttatag
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