Helobdella robusta: HELRODRAFT_98414
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Entry
HELRODRAFT_98414 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_98414
03009 Ribosome biogenesis [BR:
hro03009
]
HELRODRAFT_98414
Enzymes [BR:
hro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HELRODRAFT_98414
Spliceosome [BR:
hro03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
HELRODRAFT_98414
Ribosome biogenesis [BR:
hro03009
]
Eukaryotic type
90S particles
Helicases
HELRODRAFT_98414
Pre-60S particles
HELRODRAFT_98414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
Helicase_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
20217771
NCBI-ProteinID:
XP_009014272
JGI:
Helro1_98414
UniProt:
T1G9M5
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MTEEADNVHAEGEPNKEDKPMESLAETFKQNKSFSVLNGFVSEKSLKAVEKLGFKEMTQI
QAQCIPHLLEGRDLLGAAKTGSGKTLAFLIPVIERINKLGFKPRSGTGAIIISPTRELSM
QTFKVLEELLQFHGHTFGLVMGGTNRQQEAKKLGKGINILVATPGRLLDHLQNTPEFIFS
NLKVLVIDEADRILQDGFEEEMRQIIKILPRKRQTMLFSATQTKKTEDLVKVSLKKDVVY
VGVDDEEKKATVEGLEQGYVVCPPEKRFLVLFTFLKKYRNKKVMVFFSSCMAVKYFHDLL
NYIDLPVMCIHGQQKQAKRTETFFKFCNDSESILLCTDVAARGLDIPAVDWIVQYDPPDD
PNEYIHRVGRTARGAGGSGHALLFLTSEEILFLDYLKEAKVPLSEYEMKWNKVSNIQSQL
EKLLGKNYYLHQAAQEGYKAFIRSYVSHSLKTIFDVHKLDLQKVAQSFGLLVPPHVPLKS
NSLKRKNSNFKYEGGIDKKRKLEKNKFYKKVSSRSNNKSKK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagaagctgataatgtacatgcagaaggtgaaccaaataaagaagataagcca
atggaaagtcttgctgaaacgtttaaacaaaacaaatctttctcagtgctgaatggattt
gtttctgagaaatcgttgaaggcggttgagaaactcggcttcaaagagatgactcagatt
caagcacaatgtatcccacatttgctggagggcagagatttgctgggtgcagccaaaaca
ggtagtggcaagacgttggcattcctcattccggtaattgagcgcatcaataaacttggg
ttcaaaccaagaagtggcactggagcaataataatttcaccaacgagggaactttccatg
cagacgttcaaagttctggaggagttgctccaattccatggccacacatttggcctggtc
atgggtggcacaaatcgacagcaggaggcaaaaaagcttgggaaaggaatcaatattctt
gtggccacacccggaaggctcttggatcatttacaaaacacgccggagttcatattcagc
aaccttaaagttcttgtaattgatgaggcggacagaattcttcaagatggtttcgaagaa
gaaatgaggcaaatcatcaaaattttaccaagaaaaagacaaaccatgttgttttctgcc
acacagacaaagaaaactgaagatctggtgaaggtgtcgttaaaaaaagacgtggtgtat
gttggtgtcgacgatgaagagaagaaggccacagttgaaggcctggaacagggttatgtt
gtatgtccgccagaaaaaagattcttggtgctgttcacgtttttgaaaaagtacagaaat
aaaaaagttatggtgtttttcagctcctgcatggctgtcaagtatttccatgatcttctc
aattacattgatttgcccgtcatgtgcatacatggacagcaaaagcaagcaaagaggact
gaaacgttctttaaattttgcaacgattcagaatccatattgctgtgcaccgatgtggca
gcacgagggttggacattcccgccgtggactggattgttcagtacgatcctccagatgat
cccaatgagtacatacatcgagttgggagaacggctcggggtgcgggagggtcgggccac
gccctccttttcctcacgtcagaggaaattttatttctcgactacttgaaagaagccaaa
gtaccattaagtgaatatgaaatgaaatggaataaagtttctaatattcaatcacagttg
gagaagctgctgggtaagaattattacctgcaccaggctgcccaagaaggttacaaggca
ttcattcgttcctatgtctctcactcccttaagacaatatttgatgtccataaattggac
ctgcaaaaagttgctcagtcatttggtcttctcgttcctccacatgtcccactcaagtca
aatagccttaaacggaagaattcgaacttcaagtacgaagggggaattgacaaaaagaga
aaacttgaaaagaacaaattttataaaaaagtttcatctcgctcaaacaataaatcaaaa
aaatga
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