Helobdella robusta: HELRODRAFT_99472
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Entry
HELRODRAFT_99472 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
hro
Helobdella robusta
Pathway
hro04120
Ubiquitin mediated proteolysis
hro04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HELRODRAFT_99472
04120 Ubiquitin mediated proteolysis
HELRODRAFT_99472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hro04121
]
HELRODRAFT_99472
Enzymes [BR:
hro01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
HELRODRAFT_99472
Ubiquitin system [BR:
hro04121
]
Ubiquitin ligases (E3)
U-box type E3
HELRODRAFT_99472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
20217825
NCBI-ProteinID:
XP_009017152
JGI:
Helro1_99472
UniProt:
T1G9S9
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MYSVLHSLLKSADSRMATLNYMSDVLRLNIKKTQLSTDNQMSSDGFMLNVLSIMQKLSIK
IDVSKIDTMYPYHPDTRMVIGVDDSRINASYQSVKSWIDSIAHPWTPPNFSTECFFMTAQ
MHHLTILPMVRKQQRCQRAARETQNLVNELERIESQWKNSANAYRNIKLLKRWRSQVERL
TKSSLTMLVALCDPQLVDRAFLFYSLLAKYLLVIVGATTPDGIQLLPQSSTAPMLFASLP
DYFIEDFADFFLFIVQNSPNLLANIWLEDIITLIIVIICKSQFVSNRYLVAKLVEIMYIT
NPKVHPYGGRFSELIVNHHMSLDHLVPALMKFYSDVESTGASSEFYDKFSIRYHLSIIFK
YLWEKPVYQAKVIEEASGPHFVKFVNMLMNDTTYLLDESMETLKRIRELQDLMDNKSQWD
KLGLEQQQSKQKLLAQEERQCKSYLTLASETVDMFHYLTEKVQDQFLIPQLADRLAAMLN
FNLQQLCGPKCNNLKVRNPEKYSWYPKVLLSNLIDIYLHLDRSSLFPEAIANDERSYSKE
LFDDAISRMVRTNIKTDTEVEQFANLQEKVEVIVVDKQKLEIDYGDIPDEFRDPLMDTLM
FDPVQLPSGTIMDRKVILRHLLNSQTDPFNRQPLTEDQLVSLPELKAQVMEWAKSRRHEQ
MKMKE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcgtgctgcatagtttgttgaaatcagccgatagcaggatggcaacattgaac
tacatgtccgatgtcttgaggttgaatattaagaagacgcaacttagtacagacaaccag
atgagttcagacggtttcatgctaaacgttcttagcataatgcagaagctatccatcaag
atagacgtatctaagatagataccatgtatccgtatcatcccgatactaggatggtaatt
ggggtagatgattccaggatcaatgcttcttatcagagtgtcaagagctggattgattct
attgcacatccctggacccctcctaacttttcgacggaatgtttcttcatgaccgcacag
atgcaccacctaactattctgcccatggttaggaagcaacagagatgtcagagagcagcc
agagaaacgcagaatttagttaacgaattggaaagaatcgagtcacaatggaagaattca
gcaaatgcttacagaaatattaaattgctcaagagatggagatcgcaagtggagcgccta
acaaagagttcgctgacgatgttggttgcattgtgcgatccacagctcgtggacagggcc
ttcttgttctacagcctgctggctaaatatctgctggtcatcgtcggagctacaacacca
gacgggatccagctcctcccacagtcgagcacggctccgatgttgttcgcatccctaccg
gactacttcatcgaggatttcgcagactttttcctgttcatcgttcaaaacagtccaaac
cttctagcgaatatctggcttgaggacataatcaccttaatcatcgtaatcatctgcaag
tctcagttcgtctcgaatcgctatttagtggcgaaactcgtcgaaatcatgtacatcact
aatccgaaggtacatccctacggcggccgatttagtgagctgattgtcaatcatcatatg
tcactcgatcatctagttccggctctcatgaagttttattcggatgtagagtcaactgga
gccagcagcgagttttacgacaagttctccataaggtaccatctcagcatcatattcaag
tacctctgggaaaagcccgtatatcaagctaaagtcatagaagaggccagcgggcctcac
tttgtgaaattcgtgaacatgctgatgaatgacacaacctacttactggacgagagtatg
gagacgttgaagagaatccgcgagcttcaggatctcatggacaacaaatcacagtgggat
aaattgggattggaacaacagcagtcgaaacaaaagttgctagcccaagaggaaaggcaa
tgcaagtcctacctgacactggcctccgaaactgttgacatgttccactacctcactgag
aaggtccaggatcagtttcttatcccacaactggccgatcgacttgccgccatgttgaat
ttcaatctgcaacaactctgtgggcctaagtgtaataatttgaaggttcgaaaccctgag
aaatactcatggtaccccaaagttcttctcagtaatttgattgacatctacctgcattta
gacagaagttcacttttcccagaagccatcgccaatgatgagagatcgtattcgaaagag
ttattcgatgatgccatttcccggatggtcaggacgaacattaaaaccgatacggaagtc
gaacagttcgctaatctgcaagagaaggttgaagttattgtggtggacaagcagaagttg
gaaattgactacggagacattccagacgaattcagagaccctctcatggacaccctgatg
ttcgacccagtccagctgccatccggaacgatcatggataggaaggtgatcctgcggcat
ctcctcaactcccaaactgacccgtttaacaggcagccattgacggaagaccaactcgtg
tcactacccgaactcaaagctcaagtcatggaatgggcaaaaagcagaagacatgagcaa
atgaaaatgaaagaataa
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integrated database retrieval system
