Halosimplex rubrum: HZS55_00185
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Entry
HZS55_00185 CDS
T06687
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hrr
Halosimplex rubrum
Pathway
hrr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HZS55_00185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrr03021
]
HZS55_00185
Transcription machinery [BR:
hrr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HZS55_00185
Prokaryotic type
Archaeal type
TFB
HZS55_00185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR_2
DUF7129
DUF4995
Motif
Other DBs
NCBI-ProteinID:
QLH79873
UniProt:
A0A7D5T8I3
LinkDB
All DBs
Position
30226..31110
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AA seq
294 aa
AA seq
DB search
MDARADADAGSVCTECGGRVREGETETVCEDCGLVAAEDAVERGPEWRSLDGDTDRRRTG
APLTESRHDRGLSTEIGYGTGSEVSGTRQRQLVRMRRQHNRARVDSKAERNKLYAYTEIR
RLVSAMSLPTSVRDQSCSLFSSAQSEELLCGRSLEGFAAAVVYATCRTQSIARTIDEVVD
VARAERNELKAAYDALNRELGLPVGPVSPTEYLPRYASELDVATDVERRAREYAVVLVES
GRMGGKNPSGVAAACLYKAATEAGVDVKQTEAAELADVSRMTIGSTVGDLDDLA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atcgacgcccgagcggacgcggacgccggctcggtgtgtacggagtgtggtgggcgagtc
cgagagggcgagacggagacggtctgcgaggactgcgggctggtcgcggcggaggacgcc
gtcgagcggggaccggagtggcggtcgctcgacggggacaccgaccgtcgccggaccggg
gcgccgctgacggagtcccggcacgaccgcgggctctcgacggagatcggctacgggacc
ggctcggaggtctccggcacgcgccagcggcagctggtgcggatgcgccgccagcacaac
cgcgcccgggtcgactcgaaggccgagcgcaacaagctctacgcctacacggagatcaga
cggctggtctccgcgatgtcgctacccacgtcggtgcgcgaccagtcgtgttcgctgttc
tcttcggcccagtccgaggagttgctctgcgggcggtcgctggaggggttcgccgccgcg
gtcgtctacgccacctgtcggacccagtccatcgcgcggacgatagacgaggtcgtcgac
gtggcccgcgccgagcggaacgaactcaaggcggcctacgacgcgctcaaccgggaactc
ggcctcccggtcgggccggtcagtccgacggagtacctgccgcggtacgcctcggagctc
gacgtggcgaccgacgtcgagcggcgggcccgcgagtacgccgtcgtgctcgtcgaatcg
ggccggatgggcgggaagaaccccagcggcgtcgccgcggcctgtctctacaaggccgcc
accgaggccggcgtcgacgtcaaacagaccgaggccgccgagctggccgacgtgtcgcgg
atgaccatcggctcgaccgtcggcgacctcgacgacctggcgtag
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