Halosimplex rubrum: HZS55_00780
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Entry
HZS55_00780 CDS
T06687
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
hrr
Halosimplex rubrum
Pathway
hrr03030
DNA replication
hrr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HZS55_00780 (fen)
03410 Base excision repair
HZS55_00780 (fen)
03450 Non-homologous end-joining
HZS55_00780 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrr03032
]
HZS55_00780 (fen)
03400 DNA repair and recombination proteins [BR:
hrr03400
]
HZS55_00780 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrr04147
]
HZS55_00780 (fen)
DNA replication proteins [BR:
hrr03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
HZS55_00780 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
HZS55_00780 (fen)
DNA repair and recombination proteins [BR:
hrr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
HZS55_00780 (fen)
Exosome [BR:
hrr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HZS55_00780 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QLH75925
UniProt:
A0A7D5P2L5
LinkDB
All DBs
Position
complement(141470..142450)
Genome browser
AA seq
326 aa
AA seq
DB search
MGNADLRDLAAIDEVPFDDLSGSVVAVDAHNWLYRYLTTTVRWTNDSIYTTADGEEVANL
VGVVQGLPKFFEHDITPVFVFDGSVVSLKDDEVEQRREEREKREEQLEQAREEGDAIAVA
RLESQTQRLTETILSTTREVLELLDVPVIEAPAEGEAQATHMAREGAVDYVGTEDYDALL
LGAPLTLRQLTSKGDPELMDFEATLDDHGITWEQLVDAAILMGTDFNEGVSGYGPKTAVT
AVREHGDIWTVFEAEDVYVENADRIRDLFLNPAVTDDYDLDREVEPDLEAARAFVCEEWE
VAAEEVERGFERIEQSVVQTGLDRWT
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgcagacctccgggacctggccgccatcgacgaggtgccgttcgacgacctg
tcggggtcggtcgtcgccgtcgacgcgcacaactggctctaccggtacctgacgacgacc
gtccgctggacgaacgactcgatatacacgaccgccgacggcgaggaggtcgcgaacctc
gtcggcgtcgtccaggggctcccgaagttcttcgaacacgacatcacgcccgtgttcgtc
ttcgacgggagcgtcgtctcgctcaaggacgacgaggtcgagcagcgccgggaggaacgc
gagaagcgggaggaacagctggaacaggcccgcgaggagggggacgcgatcgccgtcgcg
cgactggagtcccagactcagcggctcaccgagacgatcctctcgaccacccgcgaggtg
ctcgaactgctcgacgtgccggttatcgaggcgcctgcggagggggaggcccaggcgacg
cacatggctcgcgagggtgcggtcgactacgtcggcacggaggactacgacgcgctcctg
ctgggggcgccgctgacgctgcgccagctcaccagcaagggcgacccggagctgatggac
ttcgaggccaccctcgacgaccacgggatcacctgggagcaactggtcgacgccgcgatc
ctgatggggaccgacttcaacgagggcgtctcggggtacgggcccaagaccgccgtcacg
gcggtccgcgaacacggcgacatctggacggtcttcgaggccgaggacgtgtacgtcgag
aacgccgaccgcatccgtgacctgttcctgaaccccgccgtcaccgacgactacgacctc
gaccgcgaggtcgaacccgacctcgaagcggcgcgagccttcgtctgcgaggagtgggag
gtcgccgccgaggaggtcgaacgcggcttcgagcgcatcgagcagtcggtcgtccagacc
ggcctcgaccgctggacctga
DBGET
integrated database retrieval system