KEGG   Halosimplex rubrum: HZS55_04050
Entry
HZS55_04050       CDS       T06687                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
hrr  Halosimplex rubrum
Pathway
hrr03030  DNA replication
hrr03410  Base excision repair
hrr03420  Nucleotide excision repair
hrr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hrr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HZS55_04050
   03410 Base excision repair
    HZS55_04050
   03420 Nucleotide excision repair
    HZS55_04050
   03430 Mismatch repair
    HZS55_04050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hrr03032]
    HZS55_04050
   03400 DNA repair and recombination proteins [BR:hrr03400]
    HZS55_04050
DNA replication proteins [BR:hrr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HZS55_04050
DNA repair and recombination proteins [BR:hrr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HZS55_04050
   MMR (mismatch excision repair)
    Other MMR factors
     HZS55_04050
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    HZS55_04050
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: QLH76527
UniProt: A0A7D5SPC3
LinkDB
Position
complement(802900..803643)
AA seq 247 aa
MFNAIVSADTLRTTLDSVSVLVDECKIHLEEEGLEIRAVDPANVGMVDLELSASAFESYE
TDGGVIGVNLSRLEDIAGMADADQLVHLELDEETRKLHIAIDGLEYTLALIDPDSIRQEP
DLPDLDLAAEIVIEGRDIDRAVTAADMVSDHIALGVNEADEYFYVDAEGDTDDVHLELTR
DDLIDLTAGTAHSLFSLDYLKDMNKAIPKDAEVRMELGEEFPVKMHFDIAEGEGQVTFML
APRIQSE
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttcaacgccatcgtgagcgcggacacgctccggacgacactggactccgtgagcgtg
ctggtggacgagtgcaagatccacctcgaagaggagggcctggagatccgggcggtcgac
cccgccaacgtcggtatggtggacctcgaactgtcggcctcggccttcgagtcctacgag
accgacggcggcgtcatcggcgtcaacctctcgcggctggaggacatcgccggcatggcc
gacgccgaccagctggtccacctcgaactcgacgaggagacccggaaactgcacatcgcc
atcgacggcctggagtacacgctggcgctgatcgaccccgactccatccgccaggagccc
gacctgccagacctcgatctcgccgccgagatcgtcatcgaaggccgggacatcgaccgc
gccgtcaccgccgcggacatggtgagcgaccacatcgcgctcggcgtgaacgaggccgac
gagtacttctacgtcgacgcggagggcgacaccgacgacgtccacctcgaactcacccgc
gacgacctcatcgacctgaccgccggcacggcccactcgctgttctcgctggactacctg
aaggacatgaacaaggccatcccgaaagacgccgaggtgcggatggagctcggcgaggag
ttccccgtcaagatgcacttcgacatcgccgagggtgagggccaggtcacgttcatgctc
gcgccgcgcatccagagcgagtaa

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