Halosimplex rubrum: HZS55_04120
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Entry
HZS55_04120 CDS
T06687
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hrr
Halosimplex rubrum
Pathway
hrr03410
Base excision repair
hrr03430
Mismatch repair
hrr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HZS55_04120
03430 Mismatch repair
HZS55_04120
03440 Homologous recombination
HZS55_04120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrr03400
]
HZS55_04120
DNA repair and recombination proteins [BR:
hrr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HZS55_04120
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HZS55_04120
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HZS55_04120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
QLH76540
UniProt:
A0A7D5P7R2
LinkDB
All DBs
Position
complement(813246..814673)
Genome browser
AA seq
475 aa
AA seq
DB search
MSTTGPVPDLAGRATACADRLLDADEVLLASHIDADGLTSAAVASTALERADLPFETVFK
KQLDETEIATIAAREYDTVLFTDFGSGQLDAIAAHERAGDFQPVIADHHQPADAETEYHL
NPLLEGINGASELSGAGAAYVLARALEARGGQSADNRDLAALAVVGAVGDMQAVGGELVG
ANRGIVDEGVAAGVLAEGTDLSLYGKQTRPLPKLFEYATEVQIPGVSGDEAGSVRFLEGL
DVDLKEAGEWRTWVDLTDDERQTVASALVKHAVQRGVPAKKINTLVGTTYELVDEPRGTE
LRDASEFSTLLNATARYERADVGLGVCLGDRDGALDRAQTLLSNHRRNLSEGLEYVRREG
VTHEDHLQWFDAGEAIRETIVGIVAGMALGTDGVSASKPIVALARKNEAETKVSSRGTGT
LVREGLDLSVVMGEAARSVGGDGGGHDIAAGATVPAGEERAFVDAADDIVADQTG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgaccgggccggttcccgacctggcggggcgagcgaccgcctgtgccgacaga
ctgctggacgccgacgaagtgctgctggcgtcgcacatcgacgccgacggactgacgagc
gcggccgtggcgtcgacggcgctggagcgggccgacctgcccttcgagaccgtcttcaag
aaacagctcgacgagacggagatcgcgacgatcgccgcccgggagtacgacaccgtgctg
ttcaccgacttcgggagcgggcagctcgacgccatcgcggcccacgagcgggcgggcgac
ttccagccggtgatcgccgaccaccaccagcccgccgacgccgagacggagtatcatctc
aatccgctgctggagggtatcaacggcgcctccgagttgtcgggcgccggcgcggcgtac
gtcctcgcgcgggcgctcgaagcccggggcggccagtccgcggacaaccgcgacctggcg
gcgctggcggtcgtcggcgccgtcggcgacatgcaggcggtcggcggcgaactcgtcggc
gccaaccgggggatcgtcgatgagggcgtcgcggcgggcgtcctcgcggaggggacggac
ctgtcgctgtacggcaagcagacccgaccgctgccgaagctgttcgagtacgcgacggag
gtgcagatccccggcgtctccggcgacgaggccgggtcggtccgcttcctggaggggctg
gacgtggatctcaaggaggcgggcgagtggcggacgtgggtcgacctgaccgacgacgag
cgccagacggtcgcgagcgcgctggtgaaacacgccgtccagcgcggcgtcccggccaag
aagatcaacacgctcgtcgggacgacctacgaactggtcgacgagccccgcgggacggaa
ctgcgcgacgccagcgagttctcgacgctgctgaacgcgaccgcgcgatacgagcgggcg
gacgtgggcctgggcgtctgtctcggcgatcgcgacggagccctggaccgcgcgcagacg
ctcctctcgaaccaccggcggaacctctcggaggggctggagtacgtccgccgggagggc
gtcacccacgaggaccacctccagtggttcgacgccggcgaggcgatccgcgagacgatc
gtcgggatcgtcgccgggatggcgctggggaccgacggcgtctcggcgagcaaacccatc
gtcgcgctcgcccggaagaacgaggcggagacgaaggtgtcctcgcggggcacggggact
ctcgtccgcgagggactggacctctcggtcgtgatgggcgaggccgcacggtcggtcggg
ggagacggcggcggtcacgacatcgcggcgggcgcgacggtccctgccggggaagagcga
gcgttcgtcgacgccgccgacgacatcgtcgccgaccagaccggctga
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