Halosimplex rubrum: HZS55_04325
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Entry
HZS55_04325 CDS
T06687
Name
(GenBank) type III effector protein
KO
K02322
DNA polymerase II large subunit [EC:
2.7.7.7
]
Organism
hrr
Halosimplex rubrum
Pathway
hrr03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HZS55_04325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrr03032
]
HZS55_04325
Enzymes [BR:
hrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HZS55_04325
DNA replication proteins [BR:
hrr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
HZS55_04325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PolC_DP2_central
PolC_DP2_cat
PolC_DP2_N
LAGLIDADG_3
Intein_splicing
zf-DPOE
Uteroglobin
Hom_end
Hint
Motif
Other DBs
NCBI-ProteinID:
QLH76577
UniProt:
A0A7D5NZ17
LinkDB
All DBs
Position
860182..865536
Genome browser
AA seq
1784 aa
AA seq
DB search
MKPEDERYFERLESGLDEAFDVAEAARERGGDPTDSVEIPVARDMADRVENILGIDGVAE
RVRELEGEMSREEAALELVSDFVDGDVGDYDSRAGKVEGAVRTAVALLTEGVVAAPIEGI
DRVEILENDDGTEFVNVYYAGPIRSAGGTAQALSVLVADYARAMLGIDQYKARDDEIGRY
AEEIDLYDKETGLQYSPKEKESKFIAEHMPIMLDGEATGDEEVSGYRDLERVDSNSARGG
MCLVMAEGIALKAPKIQRYTRNLDEVDWPWLQDLIDGTIGKEEGDDEGDADGDEEGADDD
ESEADDDEGEAPAGPPRLDPSKKFLRDLIAGRPVFSHPSEAGGFRLRYGRARNHGNATAG
VHPATMHLVDDFLATGTQIKTERPGKAAGVVPVDTIEGPTVRLANGEVRRIDDPEDALEV
RNGVEKVIDLGEYLVNYGEFVENNHPLAPASYTVEWWAQEFDDAGADVQAMRDSLDVDLS
DPSAEEALEWVEAYDAPLHPKYTYCWHDLSVDEVCALADAVDEGRIAQTDGASEARSASK
VSGESEVRSASDTSGDEGPASGDPRAVVRDPDDEDDSDDGAADTQHDAATDGHDRDAGAA
AAGDLVLPRSETVREAVEHLLVEHTQTEDTLVIPDWRPLARTLGFDDSLDRDWAPEDLSE
RARAYGGGEASDAQLESSAASTEDGANAVLAVGEIAPFDVRERAPTRIGNRMGRPEKSES
RDLSPAVHTLFPIGEAGGSQRKVGDAAVAGDSYDDTQGKVELEVGRQECTDCGERTFKPR
CPDCGGVCEAVYVCPDCDHEVEPDESGRAECSRCETLARPTQTTVVDINSEFKSALANLN
ERPTAYDALKAVKGLSSEQKTPEPMEKGILRAKHGVSAFKDGTVRYDMTDLPVTAVRPSE
LDVTADAFRALGYEEDIHGQPLQHDDQLVELNVQDVVLSEGAAEHMLKTADFVDDLLESY
YGLEPFYNLEERDDLVGELVFGMAPHTSAATVGRIVGFTTAAVGYAHPYFHAAKRRNCFH
PETKVWYEDEGGELNHESIERLVEGYLDPDSAERDDFGTLVDDLDHLDGELSVPSFDNGG
SQSTQPVEALSKHPAPDHLVDIQTESGRELKLTADHKVHIYEPDLGRMVSVPAGKLDESD
CLVTPKHLDSTDPADEPKRFDLLEAFIESDVVADDRLMIKGLDKDRLYERFEHRLADDWD
GRFYPLQSTADYLGLTKKTLSNYLYRESIPVALLDNFFDSTENLLSFVPEDATLGVKRDG
TEIDRYITLNERVATLLGYYAAEGFARDQDTPKGTIHQTTVCGTDEEAREFFLDVLADEF
GVEPYVENHAKITVSGRLLRGFFDSVLEAGIFAHTKRVPQCIFDSPDRIVGAYLAGYFSG
DGTADGQAPRVSATTVSPELRSDLLALLTRLGITATVDHTEPVALSDAFPELYDEDDESL
SRHSYELAVSRDDAVRFADRVGFHRSAKDDRLRQQVGSRESASRHAYVFDGGADEYHLDP
VQEVSYTESETDHVYCLTVAENHSLVANDLSVKQCDGDEDCVMLLMDGLLNFSRQFLPDQ
RGGRMDAPLVMSSRIDPAEIDDEAHNVDIMREYPKEFYEATRELADPEDVEDVMTIAEET
LGTDEEYTGFDHTHDTTDIAAGPALSAYKTLGSMEDKMDAQLNLSRKIRAVDETDVAERI
IEYHFLPDLIGNLRAFSRQDVRCLDCGEKYRRMPLSGDCRECGGRVNLTVHEGSVNKYIE
TATRVAEEFGCRTYTKQRLEVLERSINRVFEDDTNKQSGIADFM
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccgaggacgaacgctacttcgaacggctggaatccgggctcgacgaggccttc
gacgtggccgaggcggcccgcgagcgcggcggtgacccgaccgatagcgtcgagatcccc
gtcgcccgggacatggccgaccgcgtcgagaacatcctcggaatcgacggcgtcgccgag
cgcgtccgcgagttagagggcgagatgagcagggaagaagcggcgctcgaactcgtctcg
gacttcgtcgacggcgacgtgggcgactacgactcccgggccggcaaggttgagggcgcg
gtccgcaccgcggtcgcgctgctgactgagggcgtcgtcgccgcccccatcgaggggatc
gaccgcgtcgagatcttagagaacgacgacgggacggagttcgtcaacgtctactacgcc
ggcccgatccgttccgcaggcgggaccgcacaggcgctgtcggtgctcgtcgccgactac
gcccgcgcgatgctcggtatcgaccagtacaaggcgcgcgacgacgagatcggtcgctac
gccgaggagatcgacctgtacgacaaggagaccggcctgcagtactccccgaaggagaaa
gagagcaagttcatcgccgagcacatgccgatcatgctcgacggcgaggccaccggcgac
gaggaggtgtcgggataccgggatctggaacgggtcgactccaactccgcccgcggcggc
atgtgtctcgtcatggccgaggggatcgcgctgaaggccccgaagatccagcgatacacc
cgaaatctggacgaggtcgactggccgtggctgcaggacctcatcgacggcaccatcggc
aaagaggagggtgacgacgagggcgacgcggacggcgacgaggagggcgccgacgacgac
gagagcgaggccgacgacgacgagggcgaagcgcccgcgggaccgccccggctggacccc
tcgaagaagttcctccgggacctcatcgcggggcggccggtcttctcgcacccgagcgag
gccgggggcttccgactgcgctacggccgggcgcgcaaccacgggaacgccacggcgggc
gtccacccggcgacgatgcacctcgtcgacgacttcctcgcgacgggcacccagatcaag
accgagcgcccggggaaggccgccggggtcgtccccgtcgacaccatcgagggaccgacc
gtcaggctggcgaacggcgaggtccgccgcatcgacgaccccgaggacgccctcgaagtc
cgcaacggcgtcgagaaggtgatcgacctgggcgagtacctcgtcaactacggcgagttc
gtcgagaacaaccacccgctggcccccgcctcctacaccgtcgagtggtgggcccaggag
ttcgacgacgccggcgcggacgtgcaggcgatgcgcgactcgctggacgtggatctgtcg
gacccgagcgccgaggaggccctcgagtgggtcgaggcgtacgacgcgccgctgcacccc
aaatacacctactgctggcacgatctgtccgtcgacgaggtgtgcgcgctggccgacgcc
gtcgacgaggggcggatcgcgcaaacggacggggcgagcgaggcgcgaagcgcctcgaaa
gtgagcggggagagcgaggtgcggagcgcctcggacacgagcggggacgaaggacccgcg
agcggcgacccgcgagcagtcgtccgggaccccgacgacgaggacgacagcgacgacggc
gcggccgacacccagcacgacgccgcgacggacggccacgaccgcgacgcgggcgccgcg
gcggcgggcgacctcgtgctcccccgttccgagacggttcgggaggccgtcgagcacctc
ctcgtcgagcacacccagaccgaggacacgctggtgatccccgattggcgcccgctcgcg
cggacgctcgggttcgacgactcgctcgaccgcgactgggcgcccgaggacctctccgaa
cgcgcgagagcctacggcggcggcgaggccagcgacgcgcaactggagtcgtcggcggcc
tcgaccgaggacggcgccaacgccgtcctcgccgtcggcgagatagcacccttcgacgtg
cgcgagcgagcgccgacccgcatcggcaaccggatgggtcgcccggagaagtcggagagt
cgcgacctctcgccggcggtccacactctgttccccatcggcgaggccggcggctcccag
cggaaggtcggcgacgccgccgtggccggcgacagctacgacgacacccaggggaaggtc
gaactcgaagtcggccgccaggagtgtaccgactgcggcgaacgaaccttcaaaccccgc
tgtcccgactgcggcggcgtctgcgaggccgtctacgtctgccccgactgcgaccacgag
gtcgaacccgacgagtccggccgcgcggagtgttcgcgctgcgagacgctcgcccgaccc
acccagacgacggtcgtcgacatcaactcggagttcaaatccgccctcgcgaacctcaac
gaacggccgaccgcctacgacgcgctcaaggcggtgaagggcctctcctcggagcagaag
acgcccgagcccatggagaagggcattttgcgcgcgaaacacggcgtctcggcgttcaag
gacggcaccgtccgctacgacatgaccgacctgcccgtgacggcggtccgcccctccgaa
ctcgacgtgaccgccgacgccttccgggcgctgggctacgaggaagacatccacggccag
cccctccagcacgacgaccagctcgtcgaactcaacgtccaggacgtggtgctctcggag
ggcgccgccgagcacatgctcaaaaccgcggacttcgtcgacgacctgctcgaatcctac
tacggcctcgaaccgttctacaatctcgaggagcgcgacgacctcgtcggcgagctcgtc
ttcgggatggccccccacacgagcgccgcgaccgtcggccgtatcgtcggattcacgacg
gcagcggtcgggtacgctcacccctatttccacgccgcgaagcgccggaactgcttccat
ccggagacgaaggtgtggtacgaggacgaaggtggggaactcaatcacgagtcgatcgaa
cggctcgtcgaggggtatctcgatcctgacagtgccgaacgggacgacttcgggacgctc
gtagacgacctcgaccacctcgacggtgaactctccgtcccctcgttcgacaacggcggg
tcgcagtctacacagcccgtggaggcgctcagtaagcatccggcgccggatcacctcgtc
gatattcaaaccgaatccggccgagaactgaaactgactgcggaccacaaggtccacata
tacgaaccggacctcggccggatggtgtctgtacccgcggggaaactcgacgaatcggat
tgtctcgtcacaccgaaacatctcgacagtaccgacccagctgacgagccgaagcggttc
gacctcctcgaagcgttcatcgagtccgacgtcgtcgccgacgacaggctgatgatcaaa
gggctcgacaaggatcgcctgtacgagcgcttcgaacaccggctcgccgacgattgggac
ggtcgcttctacccgcttcagagtactgccgactatctcgggctgacgaagaaaacgttg
agtaactacctctaccgagagagcattccggtcgcgctactcgacaactttttcgattcg
acagagaacttgctgtcgttcgtccccgaggacgcgacgctcggtgtcaaacgcgacggg
acggagatcgatcgatacatcacactcaacgagcgggttgccacacttctcgggtactac
gccgccgaaggattcgcccgggatcaggacaccccgaagggaacgatccatcagacgaca
gtctgcggcacggacgaggaggcacgggagttcttcctcgacgtactggcggacgagttc
ggcgtcgaaccctacgtcgagaatcacgcgaagattactgtctctggccgactgcttcgc
gggttcttcgactcggtgttagaggctggtatcttcgctcacaccaagcgggtcccgcag
tgtatcttcgattcccccgaccggatcgtcggtgcgtacctcgccggatacttcagcggt
gacgggaccgccgacggacaggcacctcgcgtctcggcgacgactgtgagtccggaactc
aggtccgacctcctcgcgctgctgacccggttgggtatcaccgcgactgtcgaccatacg
gaaccagtagcactctccgacgcatttccggaactctacgacgaggacgacgagtcgctc
tcgcgccacagttacgagttggccgtctctcgggacgacgctgtccggttcgcggaccgc
gtcgggttccaccgctctgcgaaggacgaccgccttcgccaacaggtcggaagtcgtgag
tctgccagccgccacgcctacgtcttcgacggcggcgccgacgagtaccacctcgatccg
gtccaggaggtgtcgtacaccgagtccgagaccgatcacgtctactgtctcaccgtcgca
gagaatcactcgctcgtcgcgaacgacctgtcggtaaagcaatgtgacggcgacgaagac
tgtgtgatgctgctgatggacgggctgttgaacttctcccggcaatttttgccggatcag
cgaggtggtcgcatggacgcgcccctcgtcatgtcctcgcggatcgaccccgccgagatc
gacgacgaggcccacaacgtcgacatcatgcgggagtacccgaaggagttctacgaggcg
acgcgcgagctcgccgacccggaggacgtggaggacgtcatgaccatcgcggaggagacg
ctgggcaccgacgaggagtacacgggcttcgaccacacccacgacacgacggacatcgcc
gcggggccggcgctctcggcgtacaagacgctggggtcgatggaggacaagatggacgcc
cagctgaacctctcgcggaagatccgcgccgtcgacgagacggacgtggccgagcgcatc
atcgagtaccacttcctgcccgacctcatcgggaacctccgcgccttctcgcgccaggac
gtgcgttgcctcgactgcggcgagaagtaccggcggatgccgctgtcgggcgactgccgg
gagtgcggcggccgcgtcaacctcaccgtccacgaggggtcggtcaacaagtacatcgag
acggcgacgcgggtcgccgaggagttcggctgtcgcacctacaccaagcaacggctggag
gtcctcgaacggtcgatcaaccgcgtgttcgaggacgacacgaacaagcagagcggcatc
gccgacttcatgtag
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integrated database retrieval system
