Halosimplex rubrum: HZS55_04560
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Entry
HZS55_04560 CDS
T06687
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hrr
Halosimplex rubrum
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrr03016
]
HZS55_04560 (endA)
Enzymes [BR:
hrr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HZS55_04560 (endA)
Transfer RNA biogenesis [BR:
hrr03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
HZS55_04560 (endA)
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
QLH76621
UniProt:
A0A7D5P1D7
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Position
912309..913391
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AA seq
360 aa
AA seq
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MHATLSGDVVRAGERARERFYDSSGYGHPVDSGSLELAPVEAAHLLYRGDLDAVEGPDGA
AMDFRAFLSSAAVSEIAFLVYKDLRDRGFYLSPARAGWSDSSAARAAVDDPAVDFVVYPR
GSGPWDDEVAYRVGVVSEREAVPASGLGDLVLAVVDEEGALTYLQTEHREVSGTSEADLP
TGVSGELLSDRSLLWDPPAAIYDLGFYGQPLDDRDGDVIQLSLLEASYLAREGVLDVEGG
VAAVVERGREVEGERFDRRLRVYESLRERGLVPKTGYKFGADFRTYSDVQSVDDLGHSEL
LIRVLAGDHTFSPRDLALDVRLAHGVRKTMAFALVGDEDDTADTDDSDGIEWLSVTRLTP
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgacgctctcgggggacgtggttcgagcgggcgagcgggcccgcgagcgcttc
tacgactcgagcggctacggccatcccgtcgacagcgggtcgctcgaactcgcgcccgtc
gaggcggcccacctgctctaccgcggcgacctcgacgcggtcgaggggcccgacggcgcg
gcgatggacttccgggcgttcctctcctccgccgcggtctcggagatcgccttcctcgtc
tacaaggacctgcgcgaccgcgggttctacctctcgcccgcacgcgctggctggagcgac
tcctcggccgcccgggcggccgtcgacgaccccgcggtcgacttcgtcgtctatccccgc
ggctccggcccgtgggacgacgaggtggcctatcgcgtcggcgtcgtcagcgagcgcgag
gccgttccggcgagcggtctgggcgacctcgtcctcgccgtcgtcgacgaggagggcgcg
ctcacctacctgcagacggagcatcgggaggtgtcggggacgagcgaggcggaccttccg
acgggcgtctcaggcgagttgctgtccgaccggtcgctcctctgggacccgccggcggcg
atctacgacctggggttctacggccagccgctcgacgaccgggacggcgacgtgatacag
ctctcgctgctcgaagcgtcgtatctcgcccgcgagggcgtgctcgacgtcgagggtggg
gtggcggccgtggtcgagcgcggccgcgaggtcgagggcgagcgcttcgaccgccgcctg
cgggtgtacgagtcgctgcgcgagcgcggactcgtgcccaagaccggctacaagttcggc
gcggacttccggacgtattcggacgtgcagtccgtcgacgacctgggccactcggagctg
ttgatccgggtgctcgccggcgaccacaccttctcgccgcgggatctggcgctggacgtg
cggctggcccacggcgtccggaagacgatggcgttcgcgctggtcggcgacgaggacgac
accgccgacaccgacgattcggacgggatcgagtggctgtccgtgacgcggctgacgccg
tag
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