Halosimplex rubrum: HZS55_06450
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Entry
HZS55_06450 CDS
T06687
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hrr
Halosimplex rubrum
Pathway
hrr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HZS55_06450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrr03021
]
HZS55_06450
Transcription machinery [BR:
hrr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HZS55_06450
Prokaryotic type
Archaeal type
TFB
HZS55_06450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
ORC6_2nd
RB_B
Motif
Other DBs
NCBI-ProteinID:
QLH76955
UniProt:
A0A7D5T5I9
LinkDB
All DBs
Position
complement(1309996..1310934)
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AA seq
312 aa
AA seq
DB search
MATRDIYTDGFDESAGKTIAATECPECDGDLRTEGGEISCTECGLIVNEYHLDHAAAPLD
FPEGPDRERTGAPLTAARHDRGLSTEIGFRVDGKGNRLSSERRTHLGRLRREHTRAKWRS
KAERNLGHGCTEIARLVSALDLDRSVREQASVLFRSAQSEDLLRGRSIEGFAAASVYAVC
RCTDVVRTLGEVVEGARCSKSAVTNAYRVLNAELDLPAPPQRPREFVAGQVSAIGVPPEI
ERSAVEVAEAAWEDGVSIGVHPAGFAAACVEVACREQEVKLVQQDLAEAASVSPVTVRTH
RDTIEGQREGER
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgagagatatctacacggacggcttcgacgaatcggccggcaagacgatcgcg
gcgacggagtgccccgaatgcgacggcgatctccgaactgaaggtggcgagatcagctgc
accgagtgtggacttatcgtcaacgagtaccacctcgaccacgcggcggcgccgctcgac
tttcccgaggggccggatcgtgagcggaccggcgcgccgttgacggcggccagacacgac
cgcgggctgtcgaccgagatcggatttcgtgtcgacgggaaggggaatcgcctctccagt
gagagacggacgcacctgggtcggctgcggcgcgaacacacgcgggcgaagtggcgctcg
aaagccgagcggaatctcggccacggctgtacggagatcgcccgactcgtctcggcgctc
gacctcgaccggagtgttcgcgaacaagcgagtgtgttgttccggtcggcccagagcgag
gacctgctacgcggccggtcgatcgaagggttcgcggccgcgagcgtgtatgcggtctgt
cgctgtacggacgtagtgcgaacgctgggcgaagtagtggagggggcgcggtgttcgaag
tcggcggtgaccaacgcctatcgagtgctgaacgcggaactcgacctaccagccccaccc
cagcgaccgcgcgagttcgtcgccgggcaggtgtcggccattggtgttccaccggaaatc
gagcggtcggcagtcgaagtcgccgaggcggcgtgggaggatggcgtgagtatcggcgtc
caccctgcagggttcgcggcggcctgtgtggaagtcgcctgtcgcgaacaggaggtcaaa
ctcgtacagcaggacctcgccgaggcggcaagcgtaagtccggtgactgtccggacgcac
cgtgatacgatcgaaggtcagcgggagggtgagcgatga
DBGET
integrated database retrieval system
