Halosimplex rubrum: HZS55_06555
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Entry
HZS55_06555 CDS
T06687
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hrr
Halosimplex rubrum
Pathway
hrr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HZS55_06555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrr03021
]
HZS55_06555
Transcription machinery [BR:
hrr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HZS55_06555
Prokaryotic type
Archaeal type
TFB
HZS55_06555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Zn_ribbon_PriA
Auto_anti-p27
Cas12f1-like_TNB
Zn_ribbon_3
DUF7340
Motif
Other DBs
NCBI-ProteinID:
QLH76976
UniProt:
A0A7D5TC42
LinkDB
All DBs
Position
complement(1336088..1337056)
Genome browser
AA seq
322 aa
AA seq
DB search
MTQTRYDSDDGQVRQPDTTTDAVAARSCPECDGRVVEHEDRGEATCAECGLVLDEDAIDR
GPEWRSFDDGDRGEKSRVGAPTTELMHDRGLSTNIGWQNRDAYGETLSSNQRQKMQRLRT
WNERFRAKDAQERNLKQAFGEIDRMASALDLSEPVRETAGVLYRRAVEAELLPGRSIEGM
ATASLYAATRQHGAPRRVTEFADVSRVRKKRVQRAYRYVKQELGLAIEPEDPTRYVPQFA
SSLDVSDEAERMARELLDVAKRTGAHSGKSPAGLAAAAIYAAANLTNEKLTQADVSSVAD
VSRVTIRDRYQELLDIYAAREA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgactcagacacggtacgattccgacgacggacaggtacggcagcccgacacgacgacc
gacgcggtcgccgcgcggtcgtgtccggagtgcgacgggcgagtcgtcgaacacgaggac
cgcggcgaagcgacctgtgcggagtgcgggctcgtgctcgacgaggacgccatcgaccgc
gggcccgagtggcgctcgttcgacgacggcgaccgcggcgagaagagccgggtcggcgcg
ccgacgaccgagctcatgcacgacagggggctcagcacgaacatcggctggcagaacagg
gacgcctacggcgagacgctgtcgtcgaaccagcgccagaagatgcagcggttgcgcacc
tggaacgagcggttccgggcgaaggacgctcaggagcgcaacctcaagcaggcgttcggc
gagatcgaccggatggcctcggcgctggacctctcggagccggtccgcgagaccgcgggc
gtcctctaccggcgcgcggtcgaggcggagttacttccggggcggtccatcgaggggatg
gccacggcgtcgctgtacgccgccacgcgccagcacggggcgcctcgacgggtgaccgag
ttcgccgacgtgagtcgcgtccggaaaaagcgcgtccagcgggcgtaccgctacgtcaag
caggaactcgggctggccatcgagcccgaagacccgacgcggtacgtcccccagttcgcg
tcgtcgctcgacgtcagcgacgaggccgagcgaatggccagggagctgctcgacgtggcg
aaacggacgggcgctcacagcggcaagagccccgcggggctggcggcggcggccatctac
gccgcggcgaacctgaccaacgagaagctcacgcaggctgacgtgagttccgtcgcggac
gtgagccgggtgacgatccgggaccgctaccaggagctgctcgacatctacgccgcccga
gaggcgtga
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integrated database retrieval system
