Halosimplex rubrum: HZS55_08780
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Entry
HZS55_08780 CDS
T06687
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hrr
Halosimplex rubrum
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrr03032
]
HZS55_08780
03400 DNA repair and recombination proteins [BR:
hrr03400
]
HZS55_08780
Enzymes [BR:
hrr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HZS55_08780
DNA replication proteins [BR:
hrr03032
]
Prokaryotic type
DNA Topoisomerases
HZS55_08780
DNA repair and recombination proteins [BR:
hrr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HZS55_08780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
Cdd1
HHH
IMS_HHH_1
PRP1_N
DNA_pol_lambd_f
Toprim_2
DUF4332
Toprim_4
DUF6964
Motif
Other DBs
NCBI-ProteinID:
QLH77381
UniProt:
A0A7D5P2D3
LinkDB
All DBs
Position
complement(1789288..1791888)
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AA seq
866 aa
AA seq
DB search
MELIITEKNNAARRIAEILSGGDATTTQRNGVNVYEWGLTTCVGLSGHVVGVDFPEEYSD
WRDVEPVELIDADIVKSPTQENIVRTLRQLAREADEAVIATDYDREGELIGKEAYELIRE
ETDAPVKRVRFSSITEREVKSAFDEPDDIDFDLAAAGEARQVIDLVWGAALTRFLSLSAR
QLGEDFISVGRVQSPTLKLIVDREREIQAFDPEDYWELFADLAKNGEAFEAQYFYDDDGS
EADRVWDESDANEAHERLQEAQSAEVTSVRRRTRTDNPPAPFNTTAFISAAGSLGYSAQR
AMSIAEELYTTGYITYPRTDNTVYPEDLEPEELLDEFTMTHEFGDDAESLLELDEIEATE
GDDETTDHPPIHPTGAVPDRDELDEDEWEVYELVVRRFFATVAEAATWEHLRVVAAANDC
QLKATGKRLLEAGYHDVYPYSSASESFLPAVEEGDALDVTDVELEAKQTQPPRRYGQSRL
IQQMEEMGIGTKATRHNVIEKLYDRGYIESDPPRPTSLAEAVVEAAEEFADLVVSEDMTA
RLEADMSAIANGEATLDDVTEESREMLDRVFEELRESREAIGDHLQESLKADRRLGPCPE
SDHDLLVRQSRQGSYFVGCDGFPECRYTLPLPSTGEPLVLEDACEEHGLNHVKMLAGRDT
FVHGCPQCKADEADDTEDEVIGVCPDCGEEHGGDLAIKQLRSGSRLVGCTRYPDCDYSLP
LPRRGDIEITDEYCDEHDLPELVVHSGDEPWELGCPICNYREYRARQAVDDLEDLDGVGP
ATAERLETAGVEEPADLREVDPDRLATEIQGVSAGQIRDWIAQLPEVDHGDDDDPDDDTV
SGSEDGSDEGDIMDDIHAEVEEVESD
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
gtggaactgataatcacggagaagaacaacgccgcgcggcgcatcgcggagatcctgagc
ggcggggacgcgacgacgacccagcgcaacggcgtcaacgtctacgagtgggggctgacc
acctgcgtcggcctctcgggccacgtcgtcggcgtcgacttccccgaggagtattcggac
tggcgggacgtggaaccggtcgagctcatcgacgccgacatcgtcaagtcgccgacccag
gagaacatcgtccggacgctgcgccagctggcccgcgaggccgacgaggcggtcatcgcg
accgactacgaccgcgagggcgaactcatcggcaaggaggcctacgagctcatccgcgag
gagaccgacgcgccggtcaagcgggtgcgcttctcctcgatcaccgagcgcgaagtgaaa
agcgccttcgacgagcccgacgacatcgacttcgacctggccgccgcgggggaggctcgg
caggtcatcgacctcgtctggggcgcggcgctgacccgctttctctcgctgtcggcccgc
cagctcggcgaggacttcatctccgtcgggcgggtgcagtcgcccacgctgaagctcatc
gtcgaccgcgagcgcgagatccaggcgttcgaccccgaggactactgggagctgttcgcc
gacctcgcgaagaacggagaggcgttcgaggcgcagtacttctacgacgacgacggcagc
gaggccgatcgggtctgggacgagagcgacgcgaacgaggcccacgagcgcctgcaggag
gcccagagtgcagaagtcacgtcggtccgccggcgcacccggacggacaacccgccggcg
ccgttcaacaccaccgcgttcatctccgccgcggggtcgctcgggtattcggcccagcgc
gcgatgtccatcgccgaggagctgtacacgacgggctacatcacctatccgcggacggac
aacacggtctaccccgaggacttagagcccgaggagttgctcgacgagttcacgatgacc
cacgagttcggcgacgacgccgagtcgctgctcgaactcgacgagatcgaggccaccgag
ggcgacgacgagacgaccgaccacccgccgatccacccgaccggcgcggtgcccgaccgc
gacgaactcgacgaggacgagtgggaggtgtacgaactcgtcgtccgccggtttttcgcg
acggtcgccgaggccgcgacgtgggagcacctgcgcgtcgtcgccgcggccaacgactgc
cagctgaaggcgaccggcaagcgcctgctcgaagccggctaccacgacgtctacccctac
tcgtcggccagcgagtcgttcctccccgccgtcgaggagggcgacgcgctcgacgtgacc
gacgtggaactcgaggccaagcagacccagccgccccgccggtacggccagtcgcggctc
atccagcagatggaggagatgggcatcgggacgaaggccacccggcacaacgtcatcgag
aagctctacgaccgcgggtacatcgagtcggacccgccgcggccgacgtcgctggcggag
gcggtcgtcgaggccgccgaggagttcgccgacctggtcgtcagcgaggacatgaccgcc
cggctggaggcggacatgtccgccatcgccaacggcgaggcgacgctcgacgacgtgacc
gaggagtcccgcgagatgctcgacagggtgttcgaggagctccgggagtcgcgcgaggcg
atcggcgaccacctccaggagtcgctgaaggccgaccgtcggctgggcccctgtccggag
agcgaccacgacctgctcgtcaggcagagccgccagggctcgtatttcgtcggctgcgac
ggcttcccggagtgtcgctacaccctcccgctgccgagcacgggcgagccgctcgtcctc
gaagacgcctgcgaggaacacggcctgaatcacgtgaagatgctcgccggccgtgacacg
ttcgtccacggctgcccccagtgcaaggccgacgaggccgacgacaccgaggacgaggtc
atcggcgtctgtccggactgcggtgaggagcacggtggcgacctggcgatcaagcaattg
cgttcgggctcgcgactcgtggggtgtacccgctaccccgactgcgactactcgctgccg
ctgccgcgccgcggcgacatcgagatcaccgacgagtactgcgacgagcacgacctaccc
gaactcgtcgtccacagcggcgacgagccgtgggaactcggctgtcccatctgcaactac
cgggagtaccgggcccgccaggccgtcgacgacctggaggacctagacggcgtcggcccc
gccaccgccgagcgactggagacggccggggtcgaagagcccgcggacctccgcgaggtc
gaccccgaccgcctcgccacggagatccagggcgtcagcgcgggccagatccgcgactgg
atcgcgcaactgccggaggtcgaccacggcgacgacgacgacccggacgacgacaccgtg
tcgggaagcgaagacgggagcgacgagggggacatcatggacgacatccacgccgaagtc
gaggaagtcgaaagcgactga
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