Halosimplex rubrum: HZS55_09355
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Entry
HZS55_09355 CDS
T06687
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hrr
Halosimplex rubrum
Pathway
hrr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HZS55_09355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrr03021
]
HZS55_09355
Transcription machinery [BR:
hrr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HZS55_09355
Prokaryotic type
Archaeal type
TFB
HZS55_09355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Anti-TRAP
Zn_ribbon_tTFIIB
HTH_Tnp_ISL3
Sigma70_r4
A2L_zn_ribbon
DZR_2
Zn_ribbon_RPB9
Auto_anti-p27
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
QLH77489
UniProt:
A0A7D5T567
LinkDB
All DBs
Position
complement(1886949..1887917)
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AA seq
322 aa
AA seq
DB search
MSDSRLRTQRTDVQEDESTEERTDEACPECSGHLVMDEERGETVCEECGLVVETDEIDRG
PEWRAFDASEKDEKSRVGAPTTNMMHDKGLSTNIDWRDKDAYGNSLSSNQRQKMQRLRKW
NERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDENLLPGRSIEGVS
TAAVYAAARQAGVPRSLDEINEVSRVEKSEIARTYRYVIRELGLEVAPADPESYVPRFAS
ALELSDEAEHRARKLLQNAKEQGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEVADI
SEVTIRNRYHELLEAEQGLPAV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactctcgactcagaacccagcgaacagacgtacaggaagacgaatcgaccgag
gagcggaccgacgaggcctgccccgaatgttccggtcacctcgtgatggacgaggagcgc
ggcgagacggtctgcgaggagtgcgggctggtcgtcgagaccgacgagatcgaccgcggg
cccgagtggcgcgccttcgacgccagcgagaaagacgagaagtcccgcgtcggcgcgccg
acgacgaacatgatgcacgacaagggcctctcgaccaacatcgactggcgcgacaaggac
gcctacggcaactccctgtcgtcgaaccagcgccagaagatgcagcgcctgcgcaagtgg
aacgagcggttcagaactcgcgactccaaggagcgcaacctcaagcaggcgctgggcgag
atcgaccgcatggcctcggccctgggcctgcccgagaacgtccgcgagaccgcctcggtc
atctaccgccgcgcgctcgacgagaacctcctcccgggccgctccatcgagggcgtctcg
acggccgccgtctacgccgccgcccggcaggccggcgtcccgcgcagcctcgacgagatc
aacgaggtctcccgcgtcgagaagtcggagatcgcccgcacctaccgttacgtcatccgc
gaactcggcctggaggtcgcgccggccgaccccgagagctacgtgccacggttcgcctcc
gcgctcgaactctccgacgaggccgaacaccgcgcgcgcaagctcctccagaacgccaag
gagcagggcgtccactccgggaagtcccccgtgggtctggccgccgcggccgtctacgcc
gccgccctgctgaccaacgagaagaccacccaggccgccgtcagcgaggtcgccgacatc
tccgaagtgaccatccggaatcgctaccacgaactgctcgaggccgagcagggcctcccc
gcggtctga
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