Halosimplex rubrum: HZS55_10165
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Entry
HZS55_10165 CDS
T06687
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hrr
Halosimplex rubrum
Pathway
hrr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HZS55_10165 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrr03021
]
HZS55_10165 (rpoB)
Enzymes [BR:
hrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HZS55_10165 (rpoB)
Transcription machinery [BR:
hrr03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HZS55_10165 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
Zn_ribbon_TOP3B
Motif
Other DBs
NCBI-ProteinID:
QLH77641
UniProt:
U3N1P2
LinkDB
All DBs
Position
2039653..2041479
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AA seq
608 aa
AA seq
DB search
MSQQREAKVYVNGSLVGTHPDPHQLADQIRQARRRGDVSEMVNVSVKNRTREVIVNADAG
RARRPLLVIEDGEPLVSDEEVEAVTDGDIEFEDLVERGYIEFIDAEEEEDIYVAVNEEEL
DEDHTHLEVDPQLMFGIGAGMIPYPEHNASPRITMGSGMIKQSLGLPSANYRIRPDTRQH
LLHYPQLSLVKTQTTEQIGYDDRPAAQNFVVAVMSYEGFNIEDALVMNKGSVDRGLSRSH
FFRTYEGEERRYPGGQEDHFEIPDDEVRGARGEEAYTHLDEDGLVNPETHVGENDVLLGK
TSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGVVDTVTLMEGEDGSKLSKVSVRDERI
PELGDKFASRHGQKGVVGHIAPQEDMPFTEQGVVPDLIINPHALPSRMTVGHILEMIGGK
VGSLEGRRVDGTAFTGEDEDELRGSLEEHGFMSSGKEIMYSGITGEQIEAEIFLGTIFYQ
KLYHMVSNKIHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDVLIGHGAAMALKERLLD
ESDREFINVCGECGMTAVENVEQRRVYCPNCDEETEIHEVEMSYAFKLLLDEMKALGIAP
RIELEDAV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcaacgagaagccaaagtctacgtcaacgggagcctggtcgggacacacccc
gacccgcatcagctcgcagaccagatccgacaggcccgccgccgcggcgacgtgagcgag
atggtcaacgtctcggtcaagaaccgcacgcgcgaggtcatcgtcaacgccgacgccggc
cgcgcccggcggcccctcctcgtcatcgaggacggcgaaccgctcgtctccgacgaggag
gtcgaggccgtcacggacggcgacatcgagttcgaggacctcgtcgaacgcggctacatc
gagttcatcgacgccgaggaggaggaggacatctacgtcgcggtcaacgaggaggaactc
gacgaggaccacacccacctcgaagtcgacccgcagctgatgttcggtatcggcgcgggg
atgattccctaccccgaacacaacgcctcgccccgcattacgatggggtcggggatgatc
aagcagtcgctgggtctgccgagcgcgaactaccggatccgaccggacacgcgccagcac
ctgctgcactacccgcagctgtcgctggtcaagactcagaccaccgagcagatcgggtac
gacgaccgcccggccgcacagaacttcgtcgtcgcggtcatgtcctacgaggggttcaac
atcgaggacgccctggtcatgaacaaggggtcggtcgaccggggcctctcccggtcgcac
ttcttccgcacctacgagggcgaggagcgacgctaccccggcggccaggaggaccacttc
gagatccccgacgacgaggtgcggggcgcccgcggcgaggaggcctacacccacctcgac
gaggacggcctcgtcaaccccgagacccacgtcggcgagaacgacgtgctgctcgggaag
acctccccgccccggttcctcgaggagccggacgacatgggcggtctctccccgcagaaa
cggcgtgagacctccgtgacgatgcgctcgggcgaatcgggcgtcgtcgacacggtgacg
ctgatggagggcgaggacggctcgaagctctcgaaggtctcggtgcgcgacgagcgcatc
ccggaactgggcgacaagttcgcctcccggcacggccagaagggcgtcgtcggccacatc
gcgccccaggaggacatgcccttcaccgaacagggcgtcgtgccggacctcatcatcaac
ccgcacgcgctgccgtcgcgcatgaccgtcggccacatcctcgagatgatcggcgggaag
gtcggatcgctggaaggccggcgcgtcgacgggaccgccttcaccggcgaggacgaggac
gaactccgcggctcgctggaagagcacggcttcatgtccagcggcaaggagatcatgtac
tcgggcatcacgggcgagcagatcgaggccgagatcttcctcgggaccatcttctaccag
aagctctaccacatggtctcgaacaagatccacgctcgctcgcgcggtccggtgcaggtg
ctgacccgccagccgaccgaggggcgcgcccgcgagggcggcctccgcgtcggcgagatg
gaacgggacgtgctcatcggccacggcgccgcgatggcgctgaaggagcgactgctcgac
gagtccgaccgcgagttcatcaacgtctgcggcgagtgcgggatgacggcggtcgagaac
gtcgagcaacggcgcgtctactgccccaactgcgacgaggagaccgagattcacgaggtc
gagatgagctacgcgttcaagctcctgctcgacgagatgaaggcgctcggcatcgcgccg
cgcatcgaactggaggacgcagtctaa
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