Halosimplex rubrum: HZS55_11040
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Entry
HZS55_11040 CDS
T06687
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hrr
Halosimplex rubrum
Pathway
hrr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HZS55_11040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrr03021
]
HZS55_11040
Transcription machinery [BR:
hrr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HZS55_11040
Prokaryotic type
Archaeal type
TFB
HZS55_11040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Cas12f1-like_TNB
Zn_ribbon_3
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QLH77802
UniProt:
A0A7D5P574
LinkDB
All DBs
Position
complement(2218578..2219567)
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AA seq
329 aa
AA seq
DB search
MTSTNQRVTGRHVQPIEHTDEETDRESKSERERDECPECGAAGITDEKRGETVCRECGVV
LEEDVVDRGPEWRSFDARDKAQKSRVGSPTTEMLHDKGLSSVIDWQNKDANGQTLSAKKR
EQMSRLRTWDERFRSQSAQDRNLKQALGEIDRMASALGIPKDARETASVIYRRALDEELI
PGRSIEAMATGSLYAGARQAGVPRTLDELETVSRVDRKEFARAYRYIARELELAMEPTDP
AQYVPRLVSDLDLPEETKQRAVELLEAGKREAVHSGKNPVGLAAAAIYAAGRLTNVEVTQ
HEVADAADVSAVTIRDRYTELLDADDRAA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcacgaaccagcgagtgacgggccgtcacgtccagcccatcgaacacacggac
gaggagaccgaccgggagtccaagtcggagcgcgagcgcgacgagtgcccggagtgcggt
gcggctgggatcaccgacgagaagcgcggcgagacggtctgccgggagtgcggcgtcgtg
ctggaggaggacgtggtcgaccgcggtcccgagtggcggtcgttcgacgcccgcgacaag
gcccagaagagccgcgtcgggtcgccgacgaccgagatgctccacgacaaggggctgtcg
tcggtcatcgactggcagaacaaggacgccaacggccagacgctctcggcgaagaagcgc
gaacagatgtcccggctgcgcacctgggacgagcggttccgttcccagagcgcacaggac
agaaacctcaagcaggcgctgggggagatcgaccgcatggcgagcgcgctgggtatcccg
aaggacgcccgcgagacggccagcgtcatctaccgccgcgcgctcgacgaggaactcatc
cccggccggtccatcgaggcgatggccaccgggtcgctgtacgccggcgcccgccaggcg
ggcgtcccgcgcacgctcgacgaactcgaaaccgtgagccgcgtcgaccgcaaggagttc
gcgcgcgcgtacaggtacatcgcccgcgaactcgaactcgcgatggagcccaccgacccc
gcccagtacgtcccgcggctggtctcggacctggacctgcccgaggagaccaaacagcgg
gcggtcgagctgctggaagcgggcaagcgcgaggcggtccactccgggaagaacccggtc
gggctcgccgcggcggccatctacgcggccggtcgactcactaacgtcgaggtgacccag
cacgaggtcgccgacgccgccgacgtgtccgccgtgactatccgcgaccgctacaccgaa
ctgctcgacgccgacgaccgggccgcctga
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