Halosimplex rubrum: HZS55_13700
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Entry
HZS55_13700 CDS
T06687
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hrr
Halosimplex rubrum
Pathway
hrr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HZS55_13700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrr03021
]
HZS55_13700
Transcription machinery [BR:
hrr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HZS55_13700
Prokaryotic type
Archaeal type
TFB
HZS55_13700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR_2
RB_B
DZR
Motif
Other DBs
NCBI-ProteinID:
QLH80006
UniProt:
A0A7D5P3H1
LinkDB
All DBs
Position
complement(2743495..2744418)
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AA seq
307 aa
AA seq
DB search
MATRDINESRFDEDIRTESSANQCPECDGRVTTNAVETVCEDCGLVIDEQRIDHGPEWRA
YDDECERTGAPLTAARHDRGLSTEIGRGTDAKGNKLSGQKRRRLARMRREQTRGRWRSKA
ERNLAHGLGEVRRLASALELSDSVRDQACQLFRSAQNENLLRGRSIEAIAAASVYGACRC
NGLSRLLGEVSEMARVAESRVTNAYKTLNEELGLPAEPVSPSMFVPRLVSDLECPDEIRQ
RARILAEQAEERGVTTGVHPAGFAAACLYKAGQEQGQWVTQSDVAEIGNVTPTTVRTHHE
TLDELAV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccagagacatcaacgagagcagattcgacgaagacatccgaacggagtcgagt
gcgaaccagtgtcccgagtgcgacggccgggtcaccacgaacgcggtcgagacggtctgc
gaggactgtggtctggtcatcgacgaacagcgtatcgatcacgggccggagtggcgggcg
tacgacgacgagtgcgaacgaacgggcgccccactcactgcggcccgccacgatcgcggc
ctgtcgacggaaatcggtcgcggcaccgacgcgaaggggaacaaactctccgggcagaag
cgacggcgactcgcgcggatgcgccgtgaacagacccgtggtcggtggcgatcgaaagca
gaacggaatctcgcacacgggttgggcgaggtgcgccgattggcgagtgcgctcgaactc
tccgattcagtccgtgaccaggcgtgtcagctcttccggagcgcccagaacgagaatctg
ctccgtggcagatccatcgaggccatcgccgcggccagcgtgtacggggcctgccggtgc
aacggcctctcgcggttgctgggcgaggtcagcgagatggcccgcgtcgcggagtcacga
gtcacgaacgcgtacaaaacgttgaacgaggagctgggcctccccgctgagcccgtctcc
cccagcatgttcgtgccgcgactcgtctcggacctcgagtgtccggacgagatccgacag
cgggcccggatcctcgcagagcaggccgaagagcgcggcgtgacgacgggcgtccatcca
gctgggttcgcagcggcctgcctctacaaagcggggcaggaacagggacagtgggtaaca
caaagcgacgtcgcggagatagggaacgtcaccccaacgactgtccggacgcatcacgaa
acactcgatgaactcgcagtctag
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integrated database retrieval system
