Halosimplex rubrum: HZS55_17725
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Entry
HZS55_17725 CDS
T06687
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hrr
Halosimplex rubrum
Pathway
hrr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HZS55_17725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrr03019
]
HZS55_17725
03009 Ribosome biogenesis [BR:
hrr03009
]
HZS55_17725
04131 Membrane trafficking [BR:
hrr04131
]
HZS55_17725
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrr04147
]
HZS55_17725
Messenger RNA biogenesis [BR:
hrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HZS55_17725
Ribosome biogenesis [BR:
hrr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HZS55_17725
Membrane trafficking [BR:
hrr04131
]
SNARE
SNARE associated proteins
Others
HZS55_17725
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HZS55_17725
Exosome [BR:
hrr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HZS55_17725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
TIP49
AAA_5
AAA_14
AAA_22
AAA_33
NPHP3_N
nSTAND3
RNA_helicase
Mg_chelatase
AAA_7
IstB_IS21
AAA_28
Parvo_NS1
AAA_3
DUF815
ABC_tran
AAA_lid_PRS2_C
AAA_18
ATPase
Sigma54_activat
TsaE
AAA_11
AAA_24
NACHT
NB-ARC
AAA_17
PhoH
Zeta_toxin
AAA_30
AAA_19
SLFN-g3_helicase
Bac_DnaA
bpMoxR
ATPase_2
Vps4_C
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
QLH79021
UniProt:
A0A7D5P4M7
LinkDB
All DBs
Position
complement(3549462..3551732)
Genome browser
AA seq
756 aa
AA seq
DB search
MRLTVKPLKQKDAGRGLAAIDRAAMSELDLENGDYIVIEGGESTRAVARVWPGYPEDEGR
GVIRIDGRLRQEADVGIDDNVDVEKADVKPATSVSVALPQNLRVRGNVGPMIRNNLSGQA
ITEGQTVPVSFGLGPLSSMSGQKIPLKIAGTEPTGTVVVTDSTEVDVAEKPAEQITGETP
GAPEGGAPDITYEDIGGLDDELEQVREMIELPMRHPELFETLGIEPPKGVLLHGPPGTGK
TLMAKAVANEIDAYFTDISGPEIMSKYYGESEEQLREIFDEAEENSPAIVFIDEIDSIAP
KRGETQGDVERRVVAQLLSLMDGLESRGQVIVIGATNRVDAVDPALRRGGRFDREIEIGV
PDKNGRKEILQVHTRGMPLVDGIDLEQYAESTHGFVGADLESLAKESAMNALRRIRPELD
LESDEIDAEVLEHLEVTEDDFKQALKGIEPSALREVFVEVPDVTWDQVGGLEDTKERLRE
TIQWPLDYPEVFEAMDMQAAKGVLMYGPPGTGKTLLAKAIANEAQSNFISIKGPELLNKF
VGESEKGVREVFEKARSNAPTVVFFDEIDSIAGERGGNTTDSGVGERVVSQLLTELDGLE
ELEDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDEEARRKIFEVHTRDKPLAEGVDL
DDLAARTDGYVGADIEAVTREASMAATREFLASVDPEDIGDSVGNVKVTMEHFEHALGEV
GPSVDADTREQYEEIEERFDTAEAETGTDELGRTFQ
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgagactcactgtcaaacccctcaagcagaaggacgcggggcgcggactcgccgcgatc
gaccgtgcggcgatgtcggagctcgacctggagaacggcgactacatcgtcatcgagggc
ggcgagagtacccgcgcggtcgcgcgggtctggccgggctaccccgaggacgagggccgc
ggcgtcatccgcatcgacgggcggctccgccaggaggccgacgtgggcatcgacgacaac
gtcgacgtcgagaaggccgacgtgaagccggcgaccagcgtcagcgtcgccctcccgcag
aacctccgggttcgcggcaacgtcggcccgatgatccgcaacaacctcagcggccaggcc
atcaccgagggccagaccgtgcccgtcagcttcgggctcggcccgctctcgtcgatgagc
ggccagaagatcccgctgaagatcgccggcaccgaacccaccgggaccgtcgtcgtgacg
gactccacggaggtcgacgtggccgagaagcccgccgagcagatcaccggcgaaaccccc
ggcgcgcccgaaggcggcgcgcccgacatcacctacgaggacatcgggggcctggacgac
gagctcgaacaggtccgcgagatgatcgagttgccgatgcgccaccccgagctgttcgag
acgctcggcatcgagccgccgaagggcgtgctcctgcacggcccgcccggcaccgggaag
acgctcatggcgaaggccgtcgccaacgagatcgacgcgtacttcaccgacatctccggc
ccggagatcatgtcgaagtactacggggagtccgaagagcagctccgcgagatcttcgac
gaggccgaggagaactcccccgccatcgtcttcatcgacgagatcgactccatcgcgccc
aagcggggcgagacccagggcgacgtggagcgccgcgtcgtcgcgcaactgctctcgctg
atggacggcctcgaatcgcgcgggcaggtcatcgtcatcggcgccacgaaccgcgtcgac
gcggtcgacccggcgctgcgcaggggcggtcgcttcgaccgcgagatcgagatcggcgtc
ccggacaagaacggtcgcaaggagatcctgcaggtccacacccgcgggatgcccctcgtc
gacggcatcgacctggagcagtacgccgagagcacgcacggcttcgtcggcgcggatctg
gagtcgctcgccaaggagtcggcgatgaacgcgctgcggcgcatccgccccgaactcgac
ctcgaatcggacgagatcgacgccgaggtgctcgaacacctggaagtcacggaagacgac
ttcaagcaggcgctgaaggggatcgaaccctcggccctgcgcgaggtgttcgtcgaggtg
cccgacgtgacctgggaccaggtcggcgggctcgaagacaccaaagagcgcttgcgtgag
acgatccagtggccgctggactaccccgaggtgttcgaggccatggacatgcaggccgcc
aagggcgtgctgatgtacggtccgcccggcacggggaagaccttgctcgccaaggccatc
gccaacgaggcccagtcgaacttcatctcgatcaagggccccgaactgctgaacaagttc
gtcggcgaatcggagaagggcgtccgcgaggtcttcgagaaggctcgctcgaacgcaccg
accgtcgtcttcttcgacgagatcgactctatcgccggcgaacgcggcggcaacaccacc
gattcgggcgtcggcgaacgggtcgtctcccagctgctgaccgagctggacgggctggag
gagctggaggacgtggtcgtcatcgcgacgacgaaccgtccggacctcatcgacagcgcg
ctgctgcgaccgggtcgcctcgacaggcacgtccacgtgcccgtcccggacgaggaggcc
cgccggaagatcttcgaggtccacacccgcgacaagccgctcgccgagggcgtcgacctg
gacgacctggcggcccgcacggacggctacgtcggcgccgacatcgaggcggtcacccgc
gaggcgtcgatggccgcgacccgcgagttcctcgcgagcgtcgaccccgaggacatcggt
gactccgtcggcaacgtgaaggtcacgatggagcacttcgagcacgcgctcggcgaggtc
ggccccagcgtcgacgcggacactcgcgagcagtacgaggagatcgaagagcgcttcgac
accgccgaggccgagaccggcaccgacgaactcggacgcaccttccagtga
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