Halosimplex rubrum: HZS55_17955
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Entry
HZS55_17955 CDS
T06687
Name
(GenBank) mRNA surveillance protein pelota
KO
K06965
protein pelota
Organism
hrr
Halosimplex rubrum
Pathway
hrr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HZS55_17955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrr03019
]
HZS55_17955
Messenger RNA biogenesis [BR:
hrr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
HZS55_17955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-ProteinID:
QLH79064
UniProt:
A0A7D5P5R4
LinkDB
All DBs
Position
complement(3594718..3595794)
Genome browser
AA seq
358 aa
AA seq
DB search
MQVNDRHPTTEGRERVTLVPESLDDLWHLTYIVEPGDLVSGDTTRRIQRNDDDMRDTGGE
REHMWAELEVDDVEFAKFANRLRVGGVIVDCSREDQLDFHHTLNVEPFEELEVEKVWKPD
QDDRLSEAVEATENPDVAIATVEEGEAHVHTVAQYGTEERASITGPTGKAAWGDGSRPRE
ELFEELGTVLARMDVEAIILAGPGFTKQDALDYIQENERDLADRITTVDTTGVGDRGVHE
VLKRGAVDEVQTQTRISAEADLVDELTERIATGSEVAYGPEQVAEAADFGAIEQLLVLDE
RLRAERGDEGEWDIDVDAVIETTEQKGGEVTVFSGEFDPGQQLRNLGGIAALLRYRID
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcaacgaccgccacccgacgacggagggtcgggagcgggtcaccctcgtcccg
gagagcctggacgacctctggcacctcacctacatcgtcgagccgggcgatctcgtctcc
ggcgacacgacgcggcgcatccagcgcaacgacgacgacatgcgcgacaccggcggcgag
cgcgaacacatgtgggccgaactggaggtcgacgacgtggagttcgccaagttcgccaac
cgcctgcgcgtcggcggcgtcatcgtcgactgttcgcgggaggaccagctcgatttccac
cacacgctcaacgtcgaaccgttcgaggagctggaggtcgagaaggtctggaagcccgac
caggacgaccggctctccgaagcggtcgaggcgaccgagaacccggacgtggcgatcgcg
accgtcgaggagggcgaggcccacgtccacaccgtcgcccagtacgggaccgaggagcgc
gcctcgatcaccggcccgaccggcaaggccgcgtggggcgacggctcgcggccccgcgag
gagctgttcgaggaactggggacggtcctcgcccggatggacgtggaagcgatcatcctc
gccggtcccggcttcacgaagcaggacgcgctcgactacatccaggagaacgagcgggac
ctggccgaccggatcacgaccgtcgacaccaccggcgtcggcgaccgcggcgtccacgag
gtgctcaaacggggggccgtcgacgaggtccagacccagacgcgcatctccgcggaggcc
gacctggtcgacgagctgaccgagcgcatcgccacgggatcggaggtcgcctacgggccc
gagcaggtcgccgaggcggccgacttcggcgccatcgagcagttgctcgtcctcgacgag
cggctgcgcgccgagcgcggcgacgagggcgagtgggacatcgacgtcgacgccgtcatc
gagaccaccgagcagaagggcggcgaggtgaccgtcttctccggcgagttcgaccccggc
cagcaactgcgcaacctcggtggcatcgccgcgctgctgcgctaccggatcgactga
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