Halosimplex rubrum: HZS55_18095
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Entry
HZS55_18095 CDS
T06687
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hrr
Halosimplex rubrum
Pathway
hrr00100
Steroid biosynthesis
hrr00909
Sesquiterpenoid and triterpenoid biosynthesis
hrr01100
Metabolic pathways
hrr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
HZS55_18095
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
HZS55_18095
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hrr01006
]
HZS55_18095
Enzymes [BR:
hrr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
HZS55_18095
Prenyltransferases [BR:
hrr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
HZS55_18095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Arg_decarbox_C
DUF7691
Motif
Other DBs
NCBI-ProteinID:
QLH79089
UniProt:
A0A7D5T7F9
LinkDB
All DBs
Position
3621723..3622766
Genome browser
AA seq
347 aa
AA seq
DB search
MSRNQTEQMFQDDLDYCYDAVQEVSRTFALTVAELDEPMSRDICVGYLLCRIADTVEDAG
HIPPAEQRTLLDLYNRVLDPDDDATIAEFRAAVDEWIPESPNDDWEVVAQSPRVFRAFEG
LDEDSRAAIRPPVRELVSGMAMFVERYAEQGGLRLQTFGELEEYCWYAAGTVGTLVTGLL
SRNVDDSVGETLQNNARSFAMLLQLVNVSKDVATDFEEENNVYIPQELLDDQQLDTEDIR
EEDGEEFVPVIRRVVDRAEGYLDGAQTWLETMPEIRGNTLSAWAIPFLLAVGTLRELEER
PEDVIEEGDVKVSRSEVTTLFAMFSGEDDPSVAELRSKIRQQPLDEY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggaaccagaccgaacagatgtttcaggacgacctcgactactgttacgacgcc
gtccaggaggtatcgcgcacgttcgcgttgacggtcgcggagctcgacgagccgatgtcg
cgcgacatctgtgtcggctacctcctctgtcggatcgcggataccgtcgaggacgccggg
cacatcccgccggccgagcagcgaacgctactcgacctgtacaaccgggtgctcgacccc
gacgacgacgccacgattgcggagttcagggccgccgtcgacgagtggatccccgagagt
ccgaacgacgactgggaggtcgtcgcccagtcgccgcgggtgttccgcgcgttcgagggc
ctcgacgaggactcgcgggccgcgatccgaccgccggtgcgcgaactcgtcagcggcatg
gcgatgttcgtcgagcgctacgccgaacagggcgggctgcgcctgcagacgttcggcgag
ctcgaggagtactgctggtacgccgccgggaccgtcgggacgctcgtgaccggcctgctc
tcgcgcaacgtcgacgactccgtcggcgagacgctccagaacaacgcccgctcgttcgcc
atgctcctccagctggtcaacgtctcgaaggacgttgccaccgacttcgaggaggagaac
aacgtctacatcccccaggagctgctcgacgaccagcaactggacaccgaggacatccgc
gaggaggacggcgaggagttcgtccccgtcatccgccgggtcgtcgaccgcgccgagggc
tacctcgacggcgcccagacctggctcgagaccatgccggagatccgcggcaacaccctc
tcggcgtgggcgatccccttcctcctggctgtcggcacgctgcgcgaactcgaggagcgc
cccgaggacgtcatcgaggagggcgacgtgaaggtctcccgctcggaggtgacgacgctg
ttcgcgatgttctccggcgaggacgacccctcggtcgccgaactgcgctcgaagatacgt
cagcagccgctcgacgagtactga
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