Halosimplex rubrum: HZS55_20505
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Entry
HZS55_20505 CDS
T06687
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hrr
Halosimplex rubrum
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrr03400
]
HZS55_20505
DNA repair and recombination proteins [BR:
hrr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HZS55_20505
Archaeal homologous recombinant proteins
HZS55_20505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_13
AAA_15
AAA_29
AAA_27
EzrA
DUF948
ATG16
ATG14
FlgN
ATG17_like
FapA
COG6_N
ABC_tran
RPW8
MukB
Motif
Other DBs
NCBI-ProteinID:
QLH79527
UniProt:
A0A7D5SSD7
LinkDB
All DBs
Position
complement(4082503..4085202)
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AA seq
899 aa
AA seq
DB search
MRFERVRLSNFKCYDDADVRLDRGVTVIHGLNGSGKSSLLEACFFALYGSKALDNTLDEV
VTIGADDAEVELWFAHDGDAYHVERRVRATGEQAQTAKCVLEGPEGTVEGARDVRGYVEG
LLRMDAEAFVNCAYVRQGEVNKLINASPDERQDMLDSLLQLGKLEEYRERASDARVGVDR
VRRDKRGSLSQLDDQIEAKEDENLHARLNDHRTDLESVTSDIERFEGQREKAVETRDRAA
EILDSHEEKRAELDDLESDIEALRETISETERDREELAETIADHRETRTEHREELGDLLP
ETELDGSADDLPEPAAVESRLDDLAERDDELQETLQEVTAAVSEHTTKAENLRESADDLE
SQAEAKREQADDLESDVAETRDALGDRREKIDGLAERIDSLESEFDDAPVDFGEAETLRE
EVGDDLSEVRETVASLESDVKNQRERIEEAEALLEQGKCPECGQDVDDSPHVESIDDDRE
RLAELENDLDDARERRDDLEDRLEEAERLVEVESEIRECRSDQSTFEQLLEQEEQTVEEK
VEQAERLREEADDLESEAADKREAAADREDAAEESRERVGEINQEVGTIRERRERLERVE
ELLDAVADATDAVERLRDRREHLKETNDERRERLAEKRERRSDLQEAFDEDRIEGAREQR
ENAEQYIEKADAKLEELRERRDELQSAIGGVEAEIEELESLRERREDLADAVERLDSLYE
EAEQLQRMYGDLRAELRRRNVESLEAMLNEIFDLVYQNDSYARIELSGEYELTVYQKDGE
PLDPEQLSGGERALFNLSLRCAIYRLLAEGIEGAAPMPPLILDEPTVFLDSGHVSQLVEL
VEAMREYGVEQILVVSHDDELVGAADDLVRVEKDSTTNRSSVRRESPEDRLAEAVEADD
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
gtgaggttcgagcgcgtcaggctgtcgaacttcaagtgctacgacgatgcggacgtgcgc
ctcgaccgcggggtgacggtcatccacgggctcaacggcagcggcaagtcctcgttgctg
gaggcctgtttcttcgcgctgtacggctcgaaggcgctggacaacaccctcgacgaggtg
gtcaccatcggtgccgacgacgccgaggtcgagctgtggttcgcccacgacggcgacgcc
taccacgtcgaacggcgcgtgcgggcgacgggcgagcaggcccagaccgccaagtgcgtg
ctggagggacccgaggggaccgtcgagggcgcccgcgacgtgcgcggctacgtcgagggc
ctgctgcggatggacgccgaggcgttcgtcaactgcgcgtacgtccgccagggcgaggtg
aacaaactcatcaacgccagcccggacgagcgccaggacatgctcgactcgctgctccaa
ctcgggaaactggaggagtaccgcgagcgcgccagcgacgcccgcgtcggcgtcgaccgc
gtccgccgggacaagcgcggctcgctctcacagctcgacgaccagatcgaggccaaggaa
gacgagaacctccacgcgcggctcaacgaccaccggacggacctcgaatcggtcacctcg
gacatcgaacgcttcgagggccagcgcgagaaggccgtcgagacgcgcgaccgagccgcg
gagatcctcgacagccacgaggagaagcgcgcggaactcgacgacctcgaatcggatatc
gaggcgctccgggagaccatctccgagaccgagcgcgaccgcgaggagctggcggagacg
atcgccgaccaccgggagaccaggacggagcaccgcgaggaactgggcgatctgctcccc
gagaccgaactcgacgggagcgccgacgacctgcccgagccggccgccgtcgagtcgcgg
ctcgacgacctcgccgagcgcgacgacgagctacaggagacgctgcaggaggtgaccgcg
gcggtgtccgagcacacgaccaaggccgagaacctccgggagagcgccgacgacctcgaa
tcgcaggccgaagcgaagcgcgagcaggccgacgacctcgaatccgacgtggccgagacc
cgagacgcgctcggcgaccgtcgcgagaagatcgacgggctggccgagcgcatcgactcc
ctggagagcgagttcgacgatgcgcccgtcgacttcggcgaggccgagaccctccgcgag
gaggtcggcgacgatctgagcgaggtccgcgagaccgtcgccagcctcgaatcggacgtg
aagaaccagcgcgagcggatcgaggaggccgaggcgctgctggagcaggggaagtgtccc
gaatgcggccaggacgtcgacgactcgccccacgtcgagtctatcgacgacgaccgcgag
cggctggccgagctggaaaacgacctcgacgatgcccgcgagcgccgcgacgacctcgag
gaccggctcgaagaggccgaacggctcgtcgaggtcgagtccgagatccgtgagtgtcgg
tccgaccaatcgacgttcgagcagttactcgaacaggaggaacagactgtcgaagagaag
gtcgagcaggccgagcggctccgcgaggaggccgacgacctcgaatcggaggcggcggac
aagcgcgaagcggcggcggaccgcgaggacgccgccgaggagtcgcgcgaacgcgtcggt
gagatcaaccaggaagtcggaacgatccgcgagcgccgcgaacgactcgaacgggtcgag
gagctgcttgacgccgtcgccgacgcgaccgacgccgtcgagcgcctgcgcgaccggcgc
gagcacctcaaagagaccaacgacgagcgccgcgaacgcctcgccgagaagcgcgagcgc
cggtcggacctgcaggaggcgttcgacgaggaccggatcgagggggcgcgcgagcagcgc
gagaacgccgagcagtacatcgagaaggccgacgcgaagctggaggagctgcgcgaacgg
cgcgacgagctacagagcgcgatcggcggcgtcgaggcggagatcgaggaactcgagtcc
ctgcgcgagcgccgtgaggacctggccgacgccgtcgagcgcctcgactcgctgtacgag
gaggccgagcaactccagcggatgtacggcgacctgcgcgccgagctgcgccggcgcaac
gtcgagagcctggaggcgatgctcaacgagatattcgatctggtctaccagaacgattcg
tacgcccgcatcgagctctccggcgagtacgaactcaccgtctaccagaaggacggcgag
ccgctcgaccccgaacagctgtcgggcggcgagcgcgccctctttaacctcagcctccgg
tgtgccatctaccggctgctcgccgagggtatcgagggcgcggccccgatgccgccgctc
atcctcgacgaaccgaccgtcttcctcgactcgggccacgtctcccagctcgtcgaactc
gtcgaggcgatgcgcgagtacggcgtcgagcagatcctcgtcgtcagccacgacgacgaa
ctcgtcggcgccgccgacgacctggtccgcgtcgagaaggactcgaccaccaatcgctcg
tcggtccgccgcgagagcccggaagaccgcctcgccgaggccgtcgaggccgacgactga
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