Halosimplex rubrum: HZS55_21620
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Entry
HZS55_21620 CDS
T06687
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hrr
Halosimplex rubrum
Pathway
hrr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HZS55_21620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrr02000
]
HZS55_21620
Transporters [BR:
hrr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HZS55_21620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Collagen
Motif
Other DBs
NCBI-ProteinID:
QLH79730
UniProt:
A0A7D5T6S2
LinkDB
All DBs
Position
complement(4305975..4307819)
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AA seq
614 aa
AA seq
DB search
MSDSTNEYSDVVDRRKFLTLAGASGAAALAGCGGGDGTPTDGSGSDGSDGSDGSDGSDGS
DGSDGSDGGSTNVVDKTHVSALQADPTNRTLNTHNTQISSEPARRLAFDRFAAYSFETRE
FQLAALDDWEFDGETVTLTFREDLSWSDGSDVTTEDIDVQFQILEKVGSAIWGYVESTEV
VDDYTYQLNLTGPTNPVMVKHQLGNMWIDTPAAAFEQFLDADAAEVQQWNWEDSDTEVIT
SGAWAYVDKNQQQWNFERNEEFHSIDNVNFSNFRFDSYQEASVPQQDFTTGGKRFDSQWS
MFAAPETVNAFQDYVMEIRSIPAKWGYGMIFNHDDPIFGDRAVRQAIAHVVNREELVANA
GPRTKFPASVPCGIAPRDIENWLGDTQSNFEDYGVGSTNTEEATQILEDAGYSMQNGTWT
SPDGEPISADYLTPGGWTDFTTMTETIVDRLNEFGFDLSVASRPTSDWQGAFIDGNFKVG
TLYWLPGQARSSFPYFPLRHQIALEAFNGGHNYDGESEQTIPAMSGDGEMTVSPLAKVDE
IATKSTNEEARPIVQEAAWHNNYDLPMLSLVSKFEQSWLTTDEWNVDLEEGDPERGIKWP
PFWLPRTGKLTAQE
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagtaccaatgagtacagcgatgtcgtagaccgccggaagttcctgacactc
gcaggagcgtccggtgccgcggcactcgcagggtgtggtggcggggacgggacaccgacc
gacgggtccggctccgacggtagtgacggctcggacggctcggacggctccgacggcagt
gacggttcggacggctccgacggcggtagcacgaacgtcgtcgacaagacccacgtaagt
gccctccaggccgacccgaccaaccgcacactcaacacgcacaacacgcagatctcctcg
gaaccggcacgccggctggcgttcgaccggttcgccgcgtactccttcgagacccgagag
ttccagctcgcggcgctggacgactgggagttcgacggcgagacggtcacgctgaccttc
cgcgaggacctctcgtggtccgacggcagcgacgtgaccaccgaggacatcgacgtgcag
ttccagatcctcgagaaggtcggcagcgccatctggggctacgtcgagagcaccgaagtc
gtcgacgactacacgtaccagctgaacctcacgggcccgaccaaccccgtgatggtcaaa
caccagctggggaacatgtggatcgacacgccggcggcggccttcgagcagttcctcgac
gccgacgccgccgaggtccagcagtggaactgggaggacagcgacaccgaggtcatcacg
agcggcgcgtgggcctacgtcgacaagaaccagcagcagtggaacttcgagcgcaacgag
gagttccacagcatcgacaacgtcaacttctcgaacttccggttcgactcctaccaggag
gcctcggtcccccagcaggacttcaccacgggcggcaagcgcttcgacagccagtggagc
atgttcgccgcgccggagacggtcaacgccttccaggactacgtcatggagatccggtcc
atcccggccaagtggggctacgggatgatcttcaatcacgacgaccccatcttcggcgac
cgcgcggtccgccaggcgatcgctcacgtcgtcaaccgcgaggaactcgtcgcgaacgcg
ggtccgcgcacgaagttcccggcgtcggtcccctgcgggatcgccccgcgggacatcgag
aactggctcggcgatacccagagcaacttcgaggactacggcgtcggctcgaccaacacc
gaggaggcgacacagatcctcgaggacgccgggtactcgatgcagaacggcacgtggacg
agccccgacggcgagcccatcagcgccgactacctgacgcccggcgggtggacggacttc
acgacgatgaccgagacgatcgtcgaccgcctcaacgagttcggcttcgatctctcggtc
gccagccggccgaccagtgactggcagggcgcgttcatcgacggcaacttcaaggtcggg
accctgtactggctgcccggccaggcccggtcgtcgttcccgtacttcccgctgcgacac
cagatcgcgctggaggcgttcaacggcggacacaactacgacggcgagtccgagcagacc
atcccggccatgagcggcgacggcgagatgacggtcagtccgctggccaaggtcgacgag
atcgcgaccaagtccaccaacgaggaggcgcggccgatcgttcaggaagccgcctggcac
aacaactacgatctgccgatgctctcgctggtctcgaagttcgagcagtcgtggctcacc
accgacgagtggaacgtcgacctcgaggaaggcgaccccgagcgcgggatcaagtggccg
ccgttctggctgccccgcacgggtaagctgacggctcaggagtaa
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