Halosimplex rubrum: HZS55_22125
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Entry
HZS55_22125 CDS
T06687
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hrr
Halosimplex rubrum
Pathway
hrr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hrr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HZS55_22125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrr03021
]
HZS55_22125
Transcription machinery [BR:
hrr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HZS55_22125
Prokaryotic type
Archaeal type
TFB
HZS55_22125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
ORC6_2nd
Motif
Other DBs
NCBI-ProteinID:
QLH79826
UniProt:
A0A7D5P383
LinkDB
All DBs
Position
4429418..4430356
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AA seq
312 aa
AA seq
DB search
MATTDPYQRDFDEQPDESIPADECPECDGRLATDGGETRCTDCGLVVEACRLDRRGPRTF
DDDTDRRRTGAPITEARHDRGLSTEIGHTTDANGNQLSDRKQRQLARLRREHTRAKWRSK
AERNLAHGCTEIARMVGALGLDHQHREQASALFRSAQNEELLHVRSIEAFAAAAVYAVCR
CTTATRTLGEVAAVAQVDRDRVANAYAVCNDDLGLLAPPQRPREYLPGLASAMDVPTETE
SQARSLAERAWDAEASIGTHPAGFAAGCLAVACRDHGVDITQLDLAAAADVSPVTVRDHR
DTVAANRAAWAR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacagatccctaccaacgtgacttcgacgaacagcccgacgaatcgatcccg
gccgacgagtgtcccgagtgcgatggacggctcgccacagacggcggggagacccgctgt
actgactgcgggctcgtcgtcgaggcgtgtcggctcgaccgacgcggcccacgcaccttc
gacgacgacaccgaccggcggcgaacgggcgcgccgatcaccgaagcgcgccacgatcgc
gggctctcgacggagatcggccacacgaccgacgccaacggtaaccagctctccgaccgg
aaacagcgacaactcgctcggctccgccgtgaacacacccgcgcgaagtggcgctcgaag
gccgaacgcaacctcgcccacggctgtacggagatcgcccggatggtcggcgcgctcggc
ctcgaccaccagcaccgcgagcaggcgagtgcgttgttccgctcggcccagaacgaggag
cttctgcacgttcgctccatcgaggcgttcgccgccgcggccgtctacgcggtctgtcgg
tgtacgaccgcgaccagaaccctcggtgaggtcgcagcggtcgcgcaggtcgaccgcgac
cgcgtcgccaacgcctacgccgtctgcaacgacgatctgggcttactggcgccgccacag
cgaccccgggagtacctccctgggcttgcgtcggcgatggacgttccaacagaaaccgag
tcccaggcacggtcgctcgccgagcgggcgtgggacgccgaggccagcatcggcacgcat
ccagcggggttcgcggcgggctgtctcgccgtcgcctgtcgggaccacggcgtggacatc
acccagctcgacctcgccgctgccgcggacgtgagtccggtgacagttcgtgaccaccgc
gacacggtcgcggccaacagggcggcgtgggcccgatga
DBGET
integrated database retrieval system
