Hymenobacter sp. BT18: HER32_00095
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Entry
HER32_00095 CDS
T06970
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hrs
Hymenobacter sp. BT18
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrs03032
]
HER32_00095
03400 DNA repair and recombination proteins [BR:
hrs03400
]
HER32_00095
Enzymes [BR:
hrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HER32_00095
DNA replication proteins [BR:
hrs03032
]
Prokaryotic type
DNA Topoisomerases
HER32_00095
DNA repair and recombination proteins [BR:
hrs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HER32_00095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QIX59677
LinkDB
All DBs
Position
16169..17284
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AA seq
371 aa
AA seq
DB search
MTSTSTATPRPKVKKKHLLPQEDAHELYKDPARQAELAGLRYYADTRPGLTRQPGPDGAF
RYLDAKGQPVTDEKTLARINSFVIPPAWTDVWIAPTTTAHLQVTGRDAKGRKQYLYHPAW
GEVRSLTKFSRLRAFGEKLADLRQQLQQDLKRPKLDKQKVVAVVLTLMDQSFIRVGNKEY
AKKNKSYGLTTLRDKHVQVEGADVRLSFVGKKGVAHDVTLHDRKLARLVQKCKEIPGQHL
FQYYDAEGHRQELESGDVNDYLHRVTGISLSAKDFRTWGGTVKMVECLESILHETPDLPK
EKVLKLAVKDVAKGLGNTPTVCSKYYIHPQVAQLFASDKLIDYLRRHDADPTEQDLLTPT
EHMVLDMLATC
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtacctccacggccaccccccggcccaaagtcaagaaaaagcacctgctcccg
caggaagatgcgcatgagctctacaaagaccccgcccggcaggccgaactggcgggcctg
cgctactacgccgacacgcgccccggcctcacccgtcagcccggccccgacggggcattt
cgctacctcgatgccaagggccagcccgtaaccgacgagaaaaccctggcccgcatcaac
tccttcgtaattccgccggcctggacggatgtctggattgcgcccaccactacggcccac
ctgcaggtaaccggccgcgacgcgaagggaagaaagcagtacctctaccacccggcctgg
ggcgaagtgcgcagcctcaccaagtttagccgcctccgggcctttggcgagaagctggcc
gacctgcgtcagcagctgcagcaagacctgaagcgccccaagctggataagcagaaggtg
gtggccgtggtgctcacgctcatggaccagtcgtttatccgcgtcggcaacaaggagtac
gccaagaaaaacaagagctacggccttaccaccctgcgcgacaagcacgtgcaggtagaa
ggcgccgatgtgcgcctgagctttgtaggcaagaaaggcgtggcccacgacgtgaccctg
cacgaccgaaaactggctcgtctggtgcagaagtgcaaggaaattcccggccagcaccta
tttcagtactacgacgcagaggggcaccgccaagagctggaatcgggcgacgtgaatgac
tacctgcaccgcgttacgggcatcagcctctcggctaaggactttcgaacctggggcggt
accgtgaaaatggtggagtgcctcgaaagcatcctgcacgaaaccccggacctacccaaa
gaaaaggtgttgaagttggcggtgaaggacgtggccaaaggcctgggcaacacgcccacc
gtgtgcagcaagtattacatccacccccaggtagcccagctgtttgcgtcggataagctt
atcgactacctgcgccgccacgacgccgaccccacggagcaggacctgctgacgcccacc
gagcacatggtgctggatatgctggccacttgttaa
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