Hymenobacter sp. BT18: HER32_00355
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Entry
HER32_00355 CDS
T06970
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hrs
Hymenobacter sp. BT18
Pathway
hrs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HER32_00355 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrs03019
]
HER32_00355 (pnp)
03016 Transfer RNA biogenesis [BR:
hrs03016
]
HER32_00355 (pnp)
Enzymes [BR:
hrs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HER32_00355 (pnp)
Messenger RNA biogenesis [BR:
hrs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HER32_00355 (pnp)
Transfer RNA biogenesis [BR:
hrs03016
]
Prokaryotic type
tRNA degradation factors
HER32_00355 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
KH_2
Motif
Other DBs
NCBI-ProteinID:
QIX59725
LinkDB
All DBs
Position
66952..69111
Genome browser
AA seq
719 aa
AA seq
DB search
MPNYNAITKSIALPDGRQITLETGKLAKFADGAVVVRLGDAMLLATVVSQPSARGDVDFL
PLSVDYQEKFGGAGNIPGSFQRREGRLSDYEILVCRIVDRILRPMFPKDYHYEVQVMITL
ISADKTVQPDALAALAASAALSISDIPFAGPISEVRVARIDGKLQINPLTADIARADIDL
IVGATADSVAMVEGEMNEVSEEEMVEAIAFAHEAIKEQVRVQQELAAAVEKSHVKREYPK
YEENDELKQRITEAVYQGAYEVAKSGNTSKAGRKEAFGAIKKPLLEQLLAENPELDQKMF
GRYYGSAEKKAIRDMMIKERTRLDGRQLTEIRPIWSEVNYLPGAHGSALFTRGETQSLTT
VALGTKLDEQIIDTAMTSGYSKFMLHYNFPAFSTGEVKPNRGPGRREIGHGNLAQRSLKK
VMPSDDENPYTVRIVSDILESNGSSSMATVCAGSMALMDAGIPVRAAVSGIAMGLVQDKE
TGEYAVLSDILGDEDHLGDMDFKVTGTEKGIVACQMDIKIQGLSAEIMTAALHQAREGRL
HILREMAKTIAAPAAELKPHTPRSHKMLIDKEYIGAVIGPGGKVIQQIQKDTNATVIIEE
KDEKGHVSIYASNQEDMQGAIDRIRAIAATPEVGETYKGKVRSIQPYGAFVEIMPGKDGL
LHISEVAHERLATLEGVLEVGQEIDVKLLDIDKKTGKYRLSRKVLLPKPERAADSNGAA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcccaattacaacgctattaccaagagcattgccctgccggatggtcggcagattacc
ctggaaaccggcaagctggccaaattcgcggatggtgccgtggtagtgcgcctcggcgac
gccatgctgctggctaccgtcgtgtcgcagcccagcgcccgcggcgacgtggatttcctg
cccctgtcggttgattaccaggagaaatttggcggtgccggtaacattcccggctcgttc
cagcgtcgcgaaggccgcttgtcggactacgagattctggtgtgccgcatcgtagaccgc
atcctgcgcccgatgttccccaaggactatcactacgaggtgcaggtaatgattacgctg
atttcggccgataagaccgtgcagcccgacgccctggccgccctggccgcttcggctgct
ctgtcgatttcggatattcccttcgccggccccatctcggaggttcgtgtggcccgcatc
gacggcaagctgcaaatcaaccccctgaccgccgacattgcccgcgccgacatcgacctg
atcgtaggagccacggccgattcggtagccatggtggaaggcgaaatgaacgaagtgagc
gaagaggaaatggtggaagccattgcctttgcccacgaagccatcaaggagcaggttcgc
gtacagcaggaattggccgccgccgtggaaaaatcccacgtgaagcgcgagtatcccaaa
tacgaggaaaacgatgagctgaagcagcgcatcaccgaggccgtatatcagggggcttac
gaggtagccaagtcgggcaataccagcaaggcgggccgtaaggaggcttttggtgctatt
aaaaagcctttgctggagcagctgctcgccgaaaaccccgagctggaccagaaaatgttc
ggccgctactacggctcggccgagaagaaggccatccgcgacatgatgatcaaggagcgc
acccgcctcgatggtcgccagctaacggaaattcgccccatctggagcgaggtaaactac
ctgcccggtgcccacggttcggccctgttcacccgcggcgaaacccagtcgctgaccacg
gttgccctcggcaccaagctcgatgagcagatcatcgacacggccatgacctcgggctac
agcaagttcatgctgcactacaatttcccggccttctcgaccggtgaggtgaagcccaac
cgcggccccggccgccgcgaaatcggccacggtaacctggcccaacgctccttgaagaag
gtaatgccttccgacgacgagaacccctacaccgtgcgcatcgtgtcggacatcctggag
tcgaacggctcttcgtcgatggcgacggtttgcgctggttcgatggccctgatggatgcg
ggtattccggtacgcgccgccgtttcgggtattgccatgggccttgtgcaggacaaggaa
accggcgagtacgccgtgctgtccgatatcctgggcgatgaggaccacctcggcgacatg
gacttcaaagtaaccggcaccgagaagggtatcgtggcttgccagatggacatcaaaatc
cagggcctgagcgccgaaatcatgacggcggccctacaccaggcccgcgaaggccgcctg
cacatcctgcgcgaaatggctaagaccattgccgcgccggctgccgagctgaagccgcat
acgcctcgctcgcacaaaatgctgatcgataaggaatacatcggcgctgttatcgggccc
ggtggcaaagtcattcagcagatccagaaggataccaacgccacggttatcatcgaggag
aaggacgagaaaggccacgtgagcatctacgcttccaaccaggaagacatgcagggggct
atcgaccggatccgggccattgcggctacccccgaagtgggcgagacctacaaaggcaag
gtgcggagcattcagccctacggtgccttcgtggaaatcatgccgggcaaagacgggctg
ttgcacatttccgaggtagcgcacgagcgtttggccaccttggaaggcgtgctggaagta
ggccaggagattgacgtgaaactgctggatatcgacaagaaaacgggcaagtaccggttg
tcgcgcaaggtgttgctgcccaaaccggagcgcgctgccgactccaacggcgcagcttaa
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