Hymenobacter sp. BT18: HER32_00950
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Entry
HER32_00950 CDS
T06970
Name
(GenBank) T9SS type A sorting domain-containing protein
KO
K20276
large repetitive protein
Organism
hrs
Hymenobacter sp. BT18
Pathway
hrs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HER32_00950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_12
Cadherin
Big_13
Por_Secre_tail
Big_9
Cadherin_4
Big_3_3
CLSTN_C
Motif
Other DBs
NCBI-ProteinID:
QIX59831
LinkDB
All DBs
Position
complement(210107..216001)
Genome browser
AA seq
1964 aa
AA seq
DB search
MRRLFLLCLALLGALGAHAQTQLLTESFATTGGYTINELTTTTSGSNNQYFLRSSVPVTG
FTTQPTGSTDNWVIAGEGVRGPAGAAPIRVAGTVALNPYNVAGKTNLQARVSLADARGAQ
ATGVWENTDFIRVKARLDGGTWVIIGGFASDGASNGVGYMRRDADNDGVFYPLDTDDTNS
PRLTLAFQEFTFPVTGTGTTLEVMVEFDYYGLSEEAAIDYISLYGSAASSAAPVLAGLET
TSLAYSEGGAATAITGSLTVNDADHTTASGATVKIATNYVSGQDVLATTPPVGSGITASF
NPADGTLSLVGTSSLANYQTALRNVTYVNTNSTNATGGNRVVTFTVVDPTGVTSNAVSRT
ITITVQLNAAAALPYTEGFESDGEGTRYSSNTFRSPGVNCLGFFRTTLPVACSPQNFTGF
AGSSVWYAEGTTLSQNPDPLKVGILQLAPVNATNTANLHLNLRLASGVSATHETFEASSY
LKVYYQVGTGSYTLLAAFYGTGAANGQLQRDTDLNGTADGATYGPALQNVDLALPANVTG
SEIRFRIEVRVDGQEEVVFDELAITGTLNNAPVISAQTRTVSENAPNGTSVGAAIAATDP
DGNTLTYAITGGNTGGAFAINASSGQLTVANSAALDFETTPSFALTVQVTDNGTPASSAS
ATVTVNLIDVDEVRPTVSIGSGASNPTSTSPIPVTVSFSESVTGLTLAEVVVSNGTASNL
SGSGASYSVSITPTGAGPVTVNLAAGVAEDAAGNGNTAAAPFSITYTLPSTTVTAVSRGQ
LSPTAMPTVTYTVTFAGNISGISTSNFSLTTTGISGAGVTSVSGSGSMYKVTVNTGTGNG
TLRLDVANSTGINPTVTNVPFTTGQEYTITKSFTNPVLSLQGTGGTGSDVTVFVDQVRLL
LAGTSTAVPGVSNGSFESYSPLGNGTFGYNPTAPGWTFNSRSGIALNGSLFSPPAAPDGT
AVAFVQSAAGNGALQQPLLASIGSYQVNFQAAQRTCCSSQDQVVNVFINGVHVGSSAPSS
TSTYQAFTSAPFTVEATAPTDLTLSNSSVAENATINTGVGTFSTTSATAGDTYTYTLVNG
PGATDNGDFSISGNTLLTARVFDFETKASYSVRVRATSSTDPGLVYEEVLTISVTDVDDT
APSAPVVLLPTNGRLLGTATPTYSGTAEVGSTVSVSVDGSLVGTTTATDGSWSLLQPGAL
SEGSHTVSARATDAANNTGPTSNTNNFTIDVTAPTVSIGSGASSPTSTSPIPVTVSFSES
VTGLTLAEVVVSNGTASNLSGSGASYSVSITPTGAGPVTVNLAAGVAEDAAGNGNTAAAP
LSITYTLPSTATSWTGVTSVSWYEASNWTNGVPTATLDATIPSGANRYPAISSGTALTRS
LTIDPGASLTQTAGTLNLKGNWVNNGTFTATGGTVAFSAASNQSAGGSSLSRFWNLRVEA
SGVTLAGAAALQRLLTLTGTLSTNGQTFTLLSDAGGTALVVNAGGTVVGPATVQRYLDPS
RNSGLGYRHYSAPVSGSTVADLATPGFTPEVSQASAYNASATPGKIKPFPTVFAYDQKRV
SRTSTYAPFDRGFVVPAGLGSSLEVGRGYAVHIAGTEKVDFTGTLTTGNVDVSLERLSDN
VDAGWALVGNPYPAPLDGGQLFESGNAPGLDQSFYVLESTGPYAGMYRAYVRGFERGEQN
ALIASGQGFFVRVSQNSTSGQLRFRDAQRVTNPNTQVAMYRGGSGTQPTVALALQADGGQ
ADPLFVYADAQATPGFDSGYDAWKLPNTSGLNLSSRTAQGQGLSIDGRPAFTATTRVELA
VGVPTAGTYTISATSLAHLPAGLEAYLHDAVTGQLTKLSSGTSYRFSVTATQALALLTGR
FTLQFSGGVALGSAAAADLAAQVSVYPNPASSRFTVLVPPIDGGRTVEATLLNSLGQVVR
RQVVGLNPSTGARFGFETGGLSQGVYSLRLRVGSNAFTKRVVLH
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atgagacgactttttctactctgcctggcgctgctgggggccttgggggctcacgcccag
acccagctgctcacagaatcctttgccaccaccgggggctacaccatcaacgagctgaca
acgacgaccagcggaagcaacaaccagtattttctgcgctccagcgtacccgtaacgggc
tttacaacccagcctaccggctctaccgacaactgggtaattgcgggcgaaggggtgcgc
ggacctgcgggcgcggcgcccatccgggtggccggcaccgtggcgcttaacccctacaac
gtagcgggcaaaaccaacctgcaggcgcgggtgagcctggcggatgcccgcggagcgcaa
gcgacgggggtgtgggaaaacaccgatttcattcgggtgaaggcccgcctcgatggtgga
acctgggtgattatcggtgggtttgccagcgacggggcctcgaatggcgtaggctacatg
cgccgcgacgccgacaacgacggcgtcttttatccgcttgataccgatgatacgaactct
ccccggctaaccctggcgtttcaggagtttacctttccggtaaccggcacgggcaccacc
ctggaggtgatggtggagtttgattactatggcctgagcgaggaagccgccattgactac
atcagcctgtacggatcggcggccagcagcgcggccccggtactggccggcctcgaaacc
accagcctggcttacagcgaaggtggcgcggccactgccatcaccggctccctaactgtg
aatgatgccgaccacacaacggccagcggcgccaccgtgaaaattgccaccaactatgtg
agcgggcaggacgtgctggcaaccacgccgccggtaggcagcggtatcacggcttccttc
aacccggccgatggcactctttccctggtgggcacctcctcgctggccaactaccagacc
gcgctgcggaacgtgacgtacgtgaataccaactccactaatgccaccggcggtaatcgg
gtggtgacttttactgtggtagacccgaccggcgtaaccagcaacgccgtgtcgcgcacc
atcacgattaccgtgcagctgaacgcggccgcggccctgccttacacggaaggctttgaa
agcgacggcgaaggcacccgctactcctccaacaccttccggtccccgggcgttaattgc
ctgggctttttccgtactacgcttcccgtggcctgctcgccccagaatttcaccggcttt
gccggcagctcggtgtggtacgcggagggcactaccctgagccagaacccggacccgcta
aaggtaggtatcctgcaactggcgcccgttaatgcgaccaacacggccaatctgcacttg
aatctgcggctggcttcgggagtatcggccacccacgaaacgtttgaagcttccagctac
ctgaaggtgtactaccaggtgggcaccggcagctacacgctgctggctgctttttacgga
accggcgcggccaatggacagctgcagcgggataccgacctgaatggcacggccgatggc
gccacctacggcccggccctccagaacgtagatctggccctgccagccaacgtaaccggg
tccgaaatccgctttcggatagaggtgcgcgtagatgggcaggaggaagtggtgtttgac
gagctggccattaccgggacgctcaacaatgcgccggttattagcgcccagacccgtacg
gtaagcgagaatgccccgaacggcaccagcgtgggggccgccatagcggctactgacccc
gatggcaatacccttacctatgccattacgggaggtaataccggcggcgccttcgccatc
aacgccagctccggccagcttacggtggccaacagtgctgccctcgactttgaaaccacg
cccagctttgcgctgacggtgcaggtaacagacaatgggactccagccagcagcgcatcg
gctacagtgacggtgaacctcattgatgtggacgaagtgcggcccacggtgagcatcggg
agcggggccagcaacccgacgagcacctcgcccatcccagtgacggtgagcttctcggaa
agtgtgacgggcctgacgctggccgaggtggtcgtgagcaacggcacggccagcaacctg
agtgggagcggggcttcctatagcgtgagcatcaccccaaccggggcagggccggtgacg
gtgaacctggccgcgggcgtggccgaggatgccgccggcaacggcaacacggccgccgcc
cccttcagcattacctacaccctgccctcaaccaccgtaacggcagtgagccgagggcag
ctttcgcccacggccatgccgacggtgacgtacacggtaacctttgccgggaacataagt
ggaatttcgaccagcaatttttccctgacaaccaccggtataagcggggcaggggtgacc
agcgtctcggggtcgggctcgatgtataaggtgacggtgaacacgggcacgggcaatggg
accctgcggctggacgtggccaacagcacgggcattaaccccacggttaccaatgtgccc
tttaccaccgggcaggaatacaccatcaccaaaagctttaccaaccccgttctgagtttg
cagggcacgggtgggacaggcagcgacgtgaccgtgtttgtggaccaagtgcggctgctg
ctggccggtaccagcaccgcggttcccggggtgagcaacggcagcttcgagtcgtacagc
ccgcttggtaacggcacgtttggctacaaccctacggcgccgggctggaccttcaacagc
cgctcgggtattgcgttgaatggcagtttgttcagccccccggcggccccggatggcacg
gccgtcgccttcgtgcaaagcgccgccggcaacggagcgctgcagcagccgctgctggcc
tccatcggcagctatcaggtaaacttccaggccgcccagcgcacctgctgctccagccag
gatcaggtagtgaacgtgtttatcaacggggtgcatgtgggcagcagcgcccccagcagc
accagtacttaccaggcctttacgtcggcccccttcacggtggaagctacggcccccacc
gatctgacgctgagcaacagcagcgtagcggaaaatgccaccatcaataccggggtcggc
acgttctccaccacgtcagccacggccggcgacacctatacctacaccctggtaaatggc
cccggcgccaccgataacggggacttcagcatctcgggcaacaccctgcttaccgcgcgg
gtgttcgacttcgaaaccaaagccagctactccgtacgggtgcgggcaaccagctccact
gaccccgggctcgtgtacgaggaagtgttgaccatcagcgtaacggatgtggacgacacg
gccccatcggcacccgtggtactgctccccaccaacggccgtctgctcggcaccgctacg
cctacctacagcggcacggccgaagtgggtagcaccgtcagcgttagcgtggatggtagt
cttgtgggcaccactacggctaccgacggtagctggagcctgctccagcccggggcgttg
agcgagggcagccacacggtgtccgccagggccaccgacgcagccaacaataccggccca
acgagcaatactaacaacttcacgatagacgttacggcccccacggtgagcattgggagc
ggggccagcagcccgacgagcacctcgcccatcccggtaacggtgagcttctcggaaagc
gtgacgggcctgacgctggccgaggtagtggtgagcaacggcacggccagcaacctgagt
gggagcggggcttcctacagcgtgagcatcacgccaaccggggcggggccggtgacggtg
aacctggctgcgggcgtggccgaggatgctgccggcaacggcaacacggccgccgctccc
ctcagcattacctacaccctgccctcaacggcaacttcctggaccggagtcacttccgtt
agctggtatgaggccagcaactggaccaacggggtgcccacggccaccctcgacgccacc
attccgtccggggcaaaccggtacccggccatcagcagcggcacggccctcacccgcagc
ctgaccattgacccgggagccagcctgacgcaaacggcgggcacgctgaacttgaagggt
aactgggtcaataacggcacctttacggccacgggcggtacggtagcctttagcgcggcc
agcaaccagagtgcgggcggcagcagcctgagccgcttctggaacctgcgtgtggaagcc
agcggcgtaacccttgcgggggccgccgccctccagcgccttcttaccctgacgggcacc
ctcagcaccaatggccagacgtttaccttgctctcggatgcgggcggcacggccctggtg
gtaaatgccgggggcacggtggtggggccggccacggtgcagcgctacctcgaccccagc
cgcaactccggcctgggctaccgccactacagcgccccggtgagcggctcaaccgtggcc
gacctggctacgcccggcttcacccccgaggtaagtcaggccagcgcctataatgcctcg
gccacgccgggcaaaatcaaaccgttcccgaccgtattcgcctatgaccagaagcgggtg
agccggaccagcacctacgcacccttcgaccgaggctttgtagtgcccgccggcctgggc
agttccctggaagtaggccgtggctacgccgtgcacattgccggtacggaaaaggttgac
tttactggtacccttaccacgggtaatgtggatgtgagcctggaacgcctcagcgacaat
gttgatgccggctgggccctggtgggcaacccttacccggctcccctggatggcggccag
ctgtttgagagcggcaatgcccccgggctggatcagagcttctacgtattggaaagcacc
ggtccctacgccggcatgtaccgcgcctacgtgcggggctttgagagaggcgagcaaaat
gccctcattgcgtcggggcagggcttcttcgtgcgggtaagccaaaacagcacgagcggc
cagctccggttccgggacgcgcaacgcgtaaccaatcccaacacgcaggtagccatgtac
cgtggcggctccggcacccagcccaccgtggccctggccctgcaagcagacggtggccag
gccgacccgctcttcgtgtatgccgatgcccaggccacgccgggcttcgacagtggctat
gatgcctggaagctgcccaataccagcggcctgaacctgagcagccgcacagcccagggc
caggggctgagcatagatggccggccggcctttaccgccactactcgcgtagagctggcc
gtgggggtgcccactgctggtacctataccatcagcgccacctccctggcccacctgccc
gcgggcctcgaggcctatctgcatgacgccgtcacggggcagcttaccaagctcagcagc
ggcaccagctaccggtttagcgtgacggcaacccaggccctggccttactcacgggccgc
tttacgctgcagttcagcggcggcgtagccctgggctcagccgcggcggccgatttggcc
gcccaggtgagcgtgtatcctaacccggcaagcagccgcttcacggtgctcgtgccgccc
attgacggcgggcgcacggtagaagccactctgctcaatagcctggggcaggtcgtacgc
cggcaggtagtcgggctgaacccgagcaccggggcccgcttcggcttcgaaaccgggggc
ctgagccagggcgtgtattcgctgcgcctgcgggtggggagcaatgccttcaccaaacgc
gtggtgttgcactga
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