Hymenobacter sp. BT18: HER32_03175
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Entry
HER32_03175 CDS
T06970
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hrs
Hymenobacter sp. BT18
Pathway
hrs00541
Biosynthesis of various nucleotide sugars
hrs01100
Metabolic pathways
hrs01250
Biosynthesis of nucleotide sugars
Module
hrs_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HER32_03175 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hrs01005
]
HER32_03175 (rfaD)
Enzymes [BR:
hrs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HER32_03175 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
hrs01005
]
Core region
HER32_03175 (rfaD)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QIX60244
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Position
761537..762505
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AA seq
322 aa
AA seq
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MIVVTGAAGFIASCLVTRLNAANFHDIVVVDNFSVERKLANLQGKHLREYVDRGEFFGWL
DLNHEQVEFIFHLGARTDTTEQDYAVLDLLNLNYSKRMWEACCRYQLPLVYASSAATYGS
GTLGYSDQDEALLPLYRPLNPYGESKNNFDNWAVQQAEKPFFWAGLKFFNVYGPNEYHKG
RMASVILHAFEQIRRTGSMELFRSHNPAYTDGGQMRDFIYVKDVVEVCFFLMQHRQHSGI
YNLGTGEARTFLDLALNTFAALDQPADIRFKDTPEDIRDKYQYFTEADMRKLRSIGYERP
FTRLEDGIDDYVRNYLMPGAYL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgtcactggtgcggccggctttattgccagctgcctcgtcacccgcctgaat
gcggccaacttccatgatatcgtggtagtggacaacttttccgtggagcgcaagctcgcc
aatctccagggcaagcacctgcgggaatacgtcgaccggggcgagtttttcggctggctt
gacctgaaccacgagcaggtagagttcatcttccacctcggggcccgcactgataccacg
gagcaggattatgccgtgctggatttgctcaacctcaactactccaagcggatgtgggag
gcgtgttgccgctaccagctgcccctggtgtacgcctcctcggcggccacctacggctcc
ggcacgctgggctactccgaccaggacgaggccctgcttcccctctaccgtcccctgaac
ccctacggcgagtcgaagaataactttgataactgggccgtgcagcaggcagaaaagcct
tttttctgggccgggctgaagtttttcaatgtatacgggcccaacgagtaccacaagggg
cgcatggcctccgtcattctgcacgccttcgagcagatccggcgcacgggctccatggag
cttttccgctcccacaaccccgcctacaccgacggcggccagatgcgggacttcatctat
gtaaaggatgtggtggaggtttgcttttttctgatgcagcaccgccagcactccggcatt
tacaacctgggcacgggtgaggcccgcaccttcctggacctggccctaaatacctttgcc
gccctcgaccagcccgccgacatccggtttaaggacacgcccgaagacatccgtgacaag
taccaatacttcaccgaggcggatatgcgcaagctgcgcagtatcggctacgagcggccc
ttcacccgcctggaggatggcatcgacgattacgtgcgtaactacctgatgccgggcgct
tacctgtag
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