Hymenobacter sp. BT18: HER32_04005
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Entry
HER32_04005 CDS
T06970
Name
(GenBank) carbohydrate-binding protein
KO
K20276
large repetitive protein
Organism
hrs
Hymenobacter sp. BT18
Pathway
hrs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HER32_04005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_6
Big_7
Glyco_hydro81C
CBM_35_2
Y_Y_Y
Por_Secre_tail
Big_3_5
Big_13
DUF7383
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
QIX60394
LinkDB
All DBs
Position
961821..967202
Genome browser
AA seq
1793 aa
AA seq
DB search
MGKTLQNPLRRLLPAWLAGPHMPRTQALKAAALSVLSITLATAPARSQIVAVGSGSYTTQ
FPGTDAAGRNAVPTGSPLLSGVAATKPVPTNEWWSGKLRNNHTNNIFNYPLTLRTHETGL
VVNYIIPPASTTEYRQPNSDVMAVTVGVQSLNATAATVSDYSDWTVTMNWHSGSNDFNAT
VGMGMPFVYLTKGAADVATVKVAVGTVTINGEMLLIKDSYNGADYAVYAPVGSTWTNNAG
TYTSTLNGKTYWSIALLNPTAPDALAAANAYKQYAYVFPASTKVDWVFTESTSVVKTTFT
VTPSVKEGTNGVVLQGLLPHQWGYMAAGSAQPAGQIYPSVRGQLKMLAGNVFSTAYTFHG
ILPTLPYLDNYSTGFSPVKLNDKVQALQNNGLAEWTDSYNEGQEMNKLIQTARIADETGN
TAARDQILTTIKNRLQDWLSAESGENAFVFYYNSTWSTLFGYPAGHHQDDNINDHHFHWG
YFIHAAAFLEQYQPGWAGQWGAMVNMLVRDAANPSRTDTQFPFLRNFDPYAGHSWADGFA
SSPMGNNQESTSESMQFNSSLIHWGAITGNKATRDLGIYLYATEQAAIEEYWFDVNDRTF
QPNYAYSATGRVWGAGYDAGTFWTQDIRAVYGIQLYPMHGGSLYLGQNHAYVQKLWTEIT
QNTGILQNEVNANTWHDLLWEYLAFIDPVKAIQLYDGFPNRPIKFGVSDAQTYYWLHAMN
ALGRVDASVTANNPEAVVFNKAGVKTYVAHNYTNAAITVNFSDGYVLNVPARKLATSKDV
AVAGTLTANATEVAANGSVTLSVATTGSGVTGVEFFDGSTSLGTVTTAPYTKTAANLPVA
IHNFYAKVYAGSLFKVTNIAAVQVGKQTSYTGTPQAVPGTIEAGKYDTYAGGLGQGIAYN
DASASNQATFEPAPTVAFRPNEYVDAVSDAAEGTTVGWVDAGEWLEYTINVATAGTHTLA
LRYAAGNSTGGGPFSLSVDGTNISGDQTVTTTGDWGAWGTKTITGLNLPAGEHVLRLSFT
QGGLNVGRMTFTYTGTSTNTPPTVSLTSPANSASFTAPASITINANAADANGTVSKVEFF
QGATKLGEDLTSPYSYTWTGVGAGTYSLTAKATDNAGAATTSSAVSVTVTAAPTAQAIPG
TIEAESYTAQQGTDKEATTDTGGGQNVDWYETGDWLDYSVNVAAAGQYTVGFRVASANGG
ATLQLRNSGGTVLGSINVGNTGGWQNWQTISTNVTLPAGVQTLRLYASASTGTNVNWLSF
TAVTTNTPPTVSLTSPAAGATFTAPASITINANAADANGTVSSVAFYNGTTLLGTDTSSP
YSYTWTGVAAGTYSLTARATDNAGAVTTSSAVSVTVSNAPSGQTIPGTIQAESYAAMLGI
QTETTTDTGGGLNVGYIETGDWMDYAVNVTTAGQYSVGFRLASEPGGGALQLRNSAGSVL
GSVTVGATGGWQSWQTISTNVTLPAGAQTLRVYATAGGLNVNWVSFTAQTTNTPPTVSLT
SPTSGASFTAPASITISANAADANGTVSSVAFYNGTTLLGTDTSAPYSYPWTGVAAGTYS
ITARATDNGGAVTTSSAVSVTVGNASTGGYCAVTSDFSYGAVSSAGNVTITFHPLGATAG
GNLAILYLRQGTSGAYPGYTMTKNAAGDFTYSLPVANGTLVNLYFTYQVGAGGPERNNAA
TPFSYTVGTACTLQARTGTALATNTSSASTAELHVAPTPSLGDATVHFRLPQAGAYTLTL
YDLNGRQLRTLATGQGSGVQKVELNTRPYPAGVYMLRLTSGQQTLTQRLVVSH
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaccctacagaacccgctgcgccggctgctaccggcgtggcttgcggggccg
catatgccccggactcaggccctgaaagccgccgcgctttcggtcttgagcatcaccctg
gctacggccccggcccgcagccagattgtagctgtgggctccggcagctacaccacccag
tttccgggtaccgatgccgccggccgcaacgctgtgcccaccggctcccccctactgagt
ggcgtggctgctaccaagccggtgcctacgaatgagtggtggtcgggcaagctgcgcaac
aaccacacgaacaacatcttcaactacccgctcacactgcgcacgcacgaaacgggcttg
gtggtgaactacattatcccgcccgccagcaccaccgagtaccgccagcccaacagcgac
gtaatggccgtgacggtgggcgtgcagagcctgaacgccaccgccgccaccgtgtcggac
tactccgactggaccgtgaccatgaactggcacagcggctccaacgacttcaacgccacc
gtgggtatgggcatgccctttgtgtacctgaccaagggggccgccgacgtggccacggtg
aaagtggccgtaggcaccgtcaccatcaacggagagatgctgctgatcaaggactcctac
aacggagccgattacgccgtgtatgcccccgtagggtccacatggaccaacaacgcgggc
acctatacgtctacgctgaatggcaagacctactggtccattgccttgctgaacccaacg
gccccggatgccctggccgctgccaacgcctacaagcagtacgcctacgtatttccggcc
agcaccaaagtagactgggtgtttacggaaagcacctccgtagtgaaaaccacgttcacc
gtgacgccctccgtgaaggaaggcaccaacggggtggtgctgcaggggctgctccctcac
cagtggggctacatggccgccggctcggctcagcccgccgggcagatttacccctcagtg
cggggccaattaaagatgctggccggcaacgtgttttccacggcgtacaccttccacggc
atcttgcccaccctgccctacctcgacaactacagcaccggctttagcccggtgaagctg
aacgacaaggtgcaggccctgcaaaacaatggcctggccgagtggactgactcctacaac
gaggggcaggaaatgaacaagctgattcagacggcccgcattgccgatgaaactggtaat
accgccgcccgtgaccagatcctgaccaccatcaaaaaccggttgcaagactggctgtcg
gcggaaagcggggaaaacgcctttgtgttttactacaactccacctggtcgacgctgttc
gggtatcccgccggccaccaccaggacgacaacatcaatgaccaccactttcactggggc
tatttcattcacgccgcggccttcctggagcaataccagcccggctgggccggccagtgg
ggggctatggtgaacatgctcgtgcgtgacgccgccaaccccagccgcaccgacacccag
tttcccttcctgcgcaacttcgacccctacgccggccactcctgggctgatggcttcgcc
agctcacccatgggcaacaaccaggagtcaacctcggaaagcatgcagttcaactcgtcc
ctgattcactggggcgccatcacgggcaacaaggccacccgcgacctgggcatctacctc
tacgccaccgagcaggctgctattgaggagtactggtttgacgtgaatgaccgcaccttc
cagcccaactacgcctacagcgccactggtcgcgtgtggggcgcgggctacgacgccggc
accttctggacccaggacatccgcgccgtgtacggcattcagctttatcctatgcacggc
ggctcactgtacctcggtcagaaccacgcctacgtgcagaagctctggacggaaatcacc
cagaacacgggcattctgcagaatgaggtgaatgccaatacctggcacgacctgctctgg
gaatacctagcgtttatcgacccggtgaaggccattcaactctacgacggcttcccgaac
cgcccaatcaagttcggggtttcggatgcgcagacgtactactggctgcacgccatgaac
gccctgggtcgggtagatgcctccgtgacggccaacaacccggaggccgtagtcttcaac
aaggccggcgtgaaaacctatgtggcgcacaattacaccaacgccgctattacggtgaac
ttctcggatggctacgtgctgaacgtaccggcccgcaagctggctaccagcaaggatgtg
gccgtagcgggtacgcttacggccaacgccaccgaagtagccgccaatggcagcgtgacg
ctgagcgtggctactactggctcgggcgtaacaggagtagagttcttcgatggcagcacg
tcgttgggcaccgtaaccaccgcgccctacaccaaaacggcagccaacttacccgtggct
attcacaacttctacgcgaaggtgtacgctggttcgctttttaaagtcaccaacattgcc
gcggtgcaggtgggcaagcaaacctcctacacgggtacgccgcaggccgtgcccggcacc
attgaggcgggcaagtacgacacctacgccggcggactgggccagggaattgcctacaac
gacgccagcgcctccaaccaggccaccttcgagcccgcgcccaccgtggccttccggccc
aatgaatacgtggacgccgtgagtgacgcagccgaaggcacgaccgtaggctgggtggat
gccggcgaatggctggaatacaccatcaacgtggctacggctggcacgcacacgctggcg
ttgcgctacgccgccggcaactccaccggtggcgggcccttctccctgtcggttgatggc
accaacatcagcggcgaccagaccgtgacgactaccggggactggggcgcctggggcacg
aaaaccattaccggcctgaatttgccggccggggaacatgtgctgcgcctgagcttcacc
cagggtggcctgaacgtcggccgcatgacgtttacctataccggtacctcaacgaacacg
ccgcccacggtgagcctaacttcgcctgcaaacagcgcctccttcacggctccggctagc
attaccattaacgccaacgcggccgatgccaatggtacggtaagcaaagtggagttcttc
cagggtgcgaccaagctcggtgaagacctgactagcccttactcttacacgtggacgggc
gtaggtgctggcacgtactctctcacggccaaagccacggacaacgccggcgcggccacc
acctcctcggccgtgagcgtgacggtgacggcagcacccacggcccaggccattcccggc
acgattgaagcggaaagctacacggcgcagcagggcacggacaaggaagccacgaccgac
acgggcggaggccagaacgtagactggtacgaaaccggtgactggctcgattactcggtc
aacgtggccgccgccggccagtacacagtgggcttccgcgtggcctcggccaacggcggg
gccaccctgcagctgcgcaatagtggtggtacggtgctgggctccatcaacgtgggcaac
acaggcggctggcagaactggcagaccatcagcaccaacgtaaccttaccagccggggtg
cagaccctgcgcctctacgcctccgcctctaccggcacgaatgtgaactggctcagcttc
acggctgtgaccacgaacacgccgcctaccgtgagcctaacctcgcctgctgctggcgcg
acgttcacggccccggcttcgattaccatcaatgccaacgcggctgatgccaacggcacc
gtcagctccgtggcgttctacaacggcacgaccttgcttggcaccgacacgtcctcgccc
tactcctacacctggacgggtgttgcggccggcacctactcactcacagcccgtgcaacg
gacaatgctggggctgtaacaacttcctcggccgtgagcgtgacggtaagcaatgcgccg
agtgggcagaccattcccggcaccattcaggccgaaagctacgcggctatgctcggtatc
cagaccgaaacgaccacagacacgggtggcggcctgaacgtgggctacatcgaaaccggg
gactggatggactacgctgtgaacgtgactacggctggccagtacagcgtgggcttccgt
ctggccagcgaaccgggtggcggcgctctgcagctgcgcaacagcgccggctcggtactg
ggcagcgtaacggttggggctaccggcggctggcagagttggcagaccatcagcaccaac
gtgaccttgcccgctggcgcccagaccctacgcgtgtacgccacggccgggggcctgaat
gtgaactgggtgtccttcacggcccagaccaccaacaccccgcccaccgtgagcctaacc
tcgcccaccagcggggccagcttcacggcgccagccagcatcacgattagtgctaacgcg
gctgatgccaacggtaccgtcagctcggtagccttctacaacggcacgaccctgctcggc
accgacacgagtgcaccgtattcttacccctggaccggcgtggccgccggcacttactct
atcacggcccgcgccaccgacaatggcggcgcggtaacgacttcctcagccgtgagcgtg
acggtaggcaatgcctccaccggcggctactgcgccgtgacctcggacttcagctacgga
gctgtgagcagcgccggcaacgtgaccatcaccttccacccgctcggggctacggccggg
ggcaacctggccatcctctacctgcgccagggcacaagtggggcctaccccggctacacg
atgaccaagaacgcggccggggacttcacctactcgctgcccgtggccaatggcacgctc
gtcaacctgtacttcacctaccaggtgggcgccggcgggcccgagcgcaacaacgccgct
acgcctttctcctacaccgtgggcaccgcctgcaccctgcaggcccgcaccggaaccgcc
ctggcaaccaatacctcctcggcttcgacagctgagctgcacgtagcgcccacgcccagc
ctgggcgatgccacggtgcatttccggttgccacaagccggtgcttacacccttacgctc
tacgacctgaacggacggcagcttcgcacgctggctacgggccagggcagcggtgttcag
aaagtagaattgaacacccgtccttacccagccggcgtgtacatgctgcgcctcacctcg
ggccagcaaaccctcacgcaacgcctggtggtaagccactaa
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