Hymenobacter sp. BT18: HER32_04905
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Entry
HER32_04905 CDS
T06970
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hrs
Hymenobacter sp. BT18
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrs03016
]
HER32_04905
Enzymes [BR:
hrs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
HER32_04905
Transfer RNA biogenesis [BR:
hrs03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HER32_04905
Prokaryotic type
HER32_04905
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QIX63419
LinkDB
All DBs
Position
1183881..1184816
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AA seq
311 aa
AA seq
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MEFELRILGSGSATPVPGRHHTAQVLSVGNTHYLLDCGEGTQRRLMEHKISPMRLSVIFI
SHLHGDHFFGLFGLLGTMQLQSRTEPLRLFGPAGLEEVLTTQFRHSGTQLSFDLEFVVVD
PTVHQLVYEDKLLTVHSLPMRHRIACCGYLLREQPRRRSLLRDRLPASLSPAQLQQLSQG
EDLLDETTGEVVLRYAEVTGPPKRARSYAFCSDTVYLPGLVELVRGVDVLYHEATFLDEL
RERAAVTFHATARQAGQLAREAGVGQLLIGHFSSRYRDLEPHLREARSEFAPTLLALEGT
VVNVPNQPTAE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgagctaaggattttgggcagcggctcggccacgccagtaccgggccgccac
cacacggcccaggtattgagcgtgggcaacacgcattacctgctggattgtggcgaaggc
acgcagcgccggctgatggagcacaaaatcagccccatgcgcctcagcgtcatctttatt
tcccacctgcacggcgaccatttctttggcttgtttggcttgctgggcactatgcagctg
caaagccgcaccgagccgctgcgcctcttcggccccgctggcctggaagaagtcctgacc
acgcagttccgccactcgggcacccagctcagcttcgacctggaatttgtggtggtggac
cccaccgtgcaccaactggtgtatgaggataagctgctgacggtgcacagcttgcccatg
cgccaccgcattgcctgctgcggctacctgctgcgcgagcagccccggcgccgctccctg
ctgcgggaccggctgccggccagcctctcccccgcccagctccagcagctcagccagggc
gaagacctactcgacgaaactaccggcgaggtagtgctccgctatgccgaggtaacgggc
ccacccaaacgcgcccgcagctacgccttctgctccgacactgtgtatttgccgggattg
gtggagctggtgcgcggggtggatgtgctctaccacgaagccaccttcctggatgagctg
cgcgagcgggccgccgttacgtttcacgccacggcccggcaggcgggccagctggcccgg
gaagccggcgtgggccaattgctcatcgggcacttttcttcccgctaccgcgacctggag
ccccacctgcgcgaggcccgctccgagtttgcgcctacgctcctggctctggaaggcacc
gtggtaaacgttcctaatcaaccaactgccgagtaa
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