Hymenobacter sp. BT18: HER32_05440
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Entry
HER32_05440 CDS
T06970
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hrs
Hymenobacter sp. BT18
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrs03016
]
HER32_05440 (truB)
Enzymes [BR:
hrs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HER32_05440 (truB)
Transfer RNA biogenesis [BR:
hrs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HER32_05440 (truB)
Prokaryotic type
HER32_05440 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QIX60651
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Position
1317806..1318699
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AA seq
297 aa
AA seq
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MSPEEKDPTAQQPAALPAPELAHNQASAELLAAWNSDEGGVLLLNKPLTWTSFDVVRKVK
NTLRIKKIGHAGTLDPLATGLLILCTGKKTKQIDLIQAQEKEYTGTFRLGQTTPSFDLET
PVDAELPYEHLTEEQVRAATAQFIGLIEQTPPLFSAVKVNGERAYEVARRGGEAEIKSKQ
VTIRAFELTRIELPEVDFRVTCSKGTYIRSLARDFGLALGCGAHLTKLVRTRIGEYAVAD
ALSMAQLEALRPPRPEGEGEQRPRRQRQPERRAGLEYYSATTQADKPATPDPLAAAE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagcccggaagaaaaagaccccactgcccaacagcccgcggccctgccggccccggaa
ctagcccataaccaggcgtccgcagagctgctggcggcctggaattccgacgaaggcggc
gtcctgctgctgaataagcccctgacctggacctcgtttgacgtggtgcgcaaagtcaag
aacacgctgcgtatcaagaaaatcggccacgccggcaccctcgacccgctggctaccggc
ctgctcattctctgcaccggcaagaaaaccaagcagattgacttgattcaggcccaggaa
aaagagtacaccggcaccttccgcctgggccagaccacgccttccttcgacctggaaacg
cccgtagacgccgagctgccctacgagcatctcaccgaggagcaggtgcgcgccgctacc
gcgcagtttatagggcttattgagcagacgcccccgctgttttcggcggtgaaggtgaac
ggggagcgggcctacgaagtggcccggcgcggcggcgaggccgaaatcaaaagcaagcag
gtgaccatccgggcgtttgagcttacccgcatcgagctgcccgaggtggatttccgcgtg
acctgctccaaaggcacctacatccgcagcctggcccgcgactttggcctggccctgggc
tgcggcgcccacctcaccaagctcgtgcgcacccgcatcggggagtacgcggtggccgat
gccttgagcatggcgcagctggaagccctgcggccaccccgccccgagggcgagggcgag
cagcggccccgccgtcagcgccagcccgagcgccgggccgggttggaatactacagcgcc
accacgcaggcggataagcccgccacgcctgacccgctggcggctgcggagtaa
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