Hymenobacter sp. BT18: HER32_05650
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Entry
HER32_05650 CDS
T06970
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hrs
Hymenobacter sp. BT18
Pathway
hrs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HER32_05650 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrs03400
]
HER32_05650 (priA)
Enzymes [BR:
hrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HER32_05650 (priA)
DNA repair and recombination proteins [BR:
hrs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HER32_05650 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
nSTAND3
AAA_30
UPF1_Zn_bind
TsaE
Zeta_toxin
AAA_16
AAA_25
DUF4197
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QIX60686
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Position
1372830..1375373
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AA seq
847 aa
AA seq
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MSLTFDFVQPQPEPATDRVTLFADVILPLPLPKLYTYRVPYELNDQVVVGGRVIVQFGAK
KTLSCIVAAVHENPPKEYQAKYILEFIDDAPVVTQPQLKLFRWMADYYLCTLGEVINAAL
PSALKLSSESRVQLHPAFVRDENPYPLSEQEEKIVEALSTGEEGKSLTFTEVGEILGITS
FHKVIKSLMQKDVVFLFEHLQDKYSPKVVKKVRLAHHYVAESAVEGLFAQLASRSKQLDV
LMRYLQKVPVYQNEHLNHQGIEKAYLTSAPHLSPSAVNTLIKNGILEQFDVIVSRFPLDD
AAEANMHFTLSEAQTTARDDVMQQFQEKDIVLLHGVTGAGKTEIYIDLIRQALDGGGQVL
YLLPEIALTAQIVTRLMRVFGSRLGVYHSKFSDNERVEVWNGVLSGRFQVVVGVRSSVFL
PFDNLALIIVDEEHESSYKQYDPAPRYNAREVALMMANFQGARTLLGSATPAVETYYQTR
TGRYGLVSLTKRFGEAGLPEIELVDTRKSREAKKMHNHFTPELMLEMERKLGAKEQIILF
QNRRGYSPFINCLDCGWIPKCQNCAVSLSYHKHAHELRCHYCGYHDRLPVECPACGSRNL
KPVGFGTEKIEDDLKIMLPEANVQRMDLDTTRAKNSYQQIIADFEKQVTNVLVGTQMVTK
GLDFANVSLVGIINADSIIHYPDFRAHERAFQMFVQVSGRAGRKGKKGKVIIQTGDPQQV
IFDKVIRNDYLEFYEYEILQRREHGYPPFMRIIRLTVKHMDQHLAERAAILLTNELVDRL
GREAVLGPEAPYIFRIRNFFLQEITIKLSREHTVLKQAKADILAAINAVKDQKDYKQARF
VADVDPM
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
ttgagcctcacgtttgactttgtgcagccgcagcccgagccggccaccgaccgcgtcacg
ctgtttgcggacgtgattttgccgctgccgctgcccaagctgtatacctaccgcgtgccc
tacgagctgaacgaccaggtagtggtaggcggtcgggtcattgtgcagtttggggccaag
aaaacgctgagctgcattgtggcggccgtgcacgaaaatccgcctaaagagtatcaggcc
aaatacatcctggagtttatcgatgatgccccggtggtgacgcagccccagctgaagctc
ttccgctggatggccgactactacctgtgcaccctgggcgaagttatcaacgcggcccta
ccctcggccctcaagcttagttctgagagccgggtgcagctacacccggcctttgtgcgc
gacgaaaacccctacccgctcagcgagcaggaggaaaagattgtggaggccctgagcact
ggcgaagaaggcaagagcctcaccttcacggaggtgggcgaaatcctgggcatcacgtcc
tttcacaaggtcatcaagtccctgatgcagaaggacgtggtctttctgttcgagcatttg
caggacaagtactcacccaaggtggtgaagaaggtgcggctggcgcatcattacgtggcc
gaatcggcggtggaaggcttatttgcgcaactggcctcccgctccaagcagctggatgtg
ctcatgcgctacctgcagaaggtgcccgtgtaccagaacgagcacctcaaccaccaaggc
attgaaaaagcttacctgacttctgccccgcacctttcgccctcagcggtgaacacgctc
atcaaaaacggcattctcgagcagttcgacgtgattgtgtcacgcttcccgctggatgat
gccgccgaggccaacatgcacttcaccctgagcgaggcccagacgacggcccgcgacgac
gtgatgcagcagtttcaggaaaaggacattgtgctgctgcacggtgtaacgggcgccggc
aaaaccgaaatctacatcgaccttatccggcaggcgctggacgggggcgggcaggtgctg
tacctgctgcccgaaattgccctcaccgcccagattgtgacccgcctgatgcgcgtgttc
ggctcccgcctgggcgtgtaccactccaagttttccgacaacgagcgggtggaagtgtgg
aacggggtgctgtcggggcggttccaggtagtagtaggcgtccgctcctcggtatttctg
cccttcgacaacctggcgctgattatcgtggacgaggagcacgagagcagctacaagcag
tacgacccggctccgcgctacaatgcccgcgaagtggcgctgatgatggccaacttccag
ggtgcccgcacgctgctgggctcggccacgcccgccgtggagacgtactaccagacgcgc
accgggcgctacgggctggtctcccttaccaagcgcttcggggaggccgggctgccggaa
attgagctggtggatacgcgcaagagccgggaagcgaagaagatgcacaaccacttcacg
cccgaactcatgctggagatggagcggaagctgggcgctaaggagcagattatcctgttt
cagaatcgccgcggctactcccctttcatcaactgtctcgactgcggctggatacccaag
tgccagaactgcgccgtgagcctcagctaccacaagcacgcccacgagctgcgctgccac
tactgcggctaccacgaccggctacccgtagagtgcccggcctgcggctcccgcaacctc
aagccggtgggcttcggcaccgaaaaaattgaggatgacctcaaaatcatgctgcccgag
gccaacgtgcagcgcatggacctggataccacccgcgctaaaaactcctaccagcaaatc
attgccgactttgaaaagcaggtaaccaacgtgttggtgggcacccagatggtcaccaag
ggcctggactttgccaatgtgagcttggtgggcatcatcaacgccgactccattatccat
tatccggatttccgggcgcacgagcgggccttccagatgtttgtgcaggtaagcgggcga
gccggacgcaagggcaaaaaggggaaggtcatcatccaaaccggcgacccgcagcaggta
attttcgacaaggttatccgcaacgactacctggagttctacgagtacgagattctgcag
cggcgcgagcatggttacccgccgtttatgcgcatcatccggctcacggtaaagcacatg
gaccagcatctggccgagcgggccgctattctgctcaccaacgagctggtagaccgcctg
ggccgcgaggcggtgctaggccccgaggccccttatatcttccgaattcgcaacttcttc
ctgcaggaaatcaccatcaagctcagccgcgagcataccgtgcttaagcaggccaaagcc
gatattctggccgccatcaacgccgtgaaagaccagaaggactacaagcaggcccgcttc
gtggccgacgtagacccgatgtag
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