Hymenobacter sp. BT18: HER32_08665
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Entry
HER32_08665 CDS
T06970
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hrs
Hymenobacter sp. BT18
Pathway
hrs03030
DNA replication
hrs03410
Base excision repair
hrs03420
Nucleotide excision repair
hrs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HER32_08665 (polA)
03410 Base excision repair
HER32_08665 (polA)
03420 Nucleotide excision repair
HER32_08665 (polA)
03440 Homologous recombination
HER32_08665 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrs03032
]
HER32_08665 (polA)
03400 DNA repair and recombination proteins [BR:
hrs03400
]
HER32_08665 (polA)
Enzymes [BR:
hrs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HER32_08665 (polA)
DNA replication proteins [BR:
hrs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HER32_08665 (polA)
DNA repair and recombination proteins [BR:
hrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HER32_08665 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HER32_08665 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
SPOB_ab
Motif
Other DBs
NCBI-ProteinID:
QIX61245
LinkDB
All DBs
Position
2063236..2066121
Genome browser
AA seq
961 aa
AA seq
DB search
MTPDAPAAQPHKLFLLDAFALIYRAHFAFSKNPRVNSKGLNTGAILGFTNTLVEVLQKEK
PTHIGVAFDAAKKTFRHEQFAEYKAQRQAMPEDIGLAIPYIKRIIKAFHIPILMVEGFEA
DDVIGTLARRAEAQGFGEVFMMTPDKDYCQLVTDCIKIYRPAFMGNAAEVLDVQHVLQRF
EIERPEQVIDILGLQGDASDNIPGIPGIGEKTAKTLIQKYGSVENLIANVHELKGKQQEN
VRNFAEQGLMSKELATIHLDVPIEFEAEKLVLDKPDENELRQLFEELEFRQLAARVLGGG
SPGSTSTAPTPRGARRPKVAEGQGSLFGSSADAAVGIAAEEGETGSFGAPAGPRLTLQDV
PHQYHLIDTPELRKSLLEFLLQQTEVSFDTETTGLDTMTARLVGLSFCWLPGEAYYVPVP
HDDHAAAQALVNEFCPFFEAAHITKVGQNIKYDLTILKHYKVQVSGPLFDTMLAHYLLEP
DMRHNMDVLAETYLHYTPVSILELIGPKGKNQKTMADLPPAEVSDYACEDADVTLQLKHV
FEPMLKEVGLLDLLNQVENPLVPVLADIEYEGVKIDSSAMGEYSAELQGYIQDIEKQIFS
EAGQEFNIGSPKQLGEVLFDKMGLGGGKIKKTKTGQYATGEEILSQLAADAPIAGLILEH
RQLTKLRSTYVEALPQLVCEVDGRVHTSFNQAVTATGRLSSTNPNLQNIPIRTEKGREIR
KAFVPRDENHVLLAADYSQVELRIMADFSGDKTMIEAFRQGLDIHTSTASKVFHVPLTEV
DGEMRRKAKTVNFGIIYGISAFGLAQRIGISRKEATEIIDTYFQEFSSVKQFMDDSINKA
RELEYATTLLGRRRYLRDINSRNATLRGYTERNAINAPIQGTAADIIKMAMINIHEWLIQ
EKLGTKMILQVHDELVFDAVQEEVEFITPKIKELMSNALLLPHGVPLEVEVGTGRNWLQA
H
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgactcccgacgcccccgctgcccaaccccacaagcttttcctgctcgacgcctttgct
ctgatctaccgcgcccactttgccttcagcaaaaacccgcgcgtgaactccaagggcctg
aacaccggggccatcctgggctttactaatacgctggtggaggtgctgcagaaggaaaag
cccacccacattggggtagcctttgatgcggccaagaaaaccttccgccacgagcagttt
gccgagtacaaggcccagcgccaggccatgcccgaagacattgggctggccattccctac
atcaagcgcattatcaaggcctttcacattcccatcttgatggtggaaggcttcgaggcc
gatgacgtgattggcaccctggcccgccgcgccgaggcccagggcttcggggaggtgttc
atgatgacgccggacaaagactactgccagctcgttaccgactgcatcaagatttaccgg
ccggctttcatgggcaatgccgccgaagtgctggacgtgcagcacgtgctgcagcgcttc
gagattgagcgtcccgagcaggtaatcgacatcctgggcttgcagggcgacgcttccgac
aacattcccggcattcccggcatcggcgaaaagacggccaaaaccctgattcagaagtac
ggctcggtggaaaacctgattgccaacgtgcacgagctcaaaggcaagcagcaggaaaac
gtgcgcaacttcgccgagcagggtttgatgagcaaggagctggccaccattcacctggac
gtgcccattgagtttgaggccgaaaagctggtgctggacaagcccgacgaaaatgagctg
cgccagttgtttgaggagctggaattccggcagctggccgcccgcgtgctgggcgggggc
agcccgggcagcaccagcaccgcccctaccccgcgcggggcccggcggcctaaagtagcc
gagggccagggtagcttgtttggctcttccgccgacgcagcggtaggcatagccgccgag
gaaggcgaaaccggctcctttggggctcccgccgggccgcgcctgacgttgcaggatgtg
ccgcaccagtaccacctgattgatacaccggagctgcgcaagtccctgcttgaattcctg
ttgcagcaaacggaggtcagcttcgacaccgaaaccaccggcctcgacaccatgacggcc
cggttggtggggctgtcgttttgctggctacccggcgaggcctactacgtgcccgtgccg
cacgatgaccacgccgccgcccaggcgctggtaaatgagttctgcccgttcttcgaggcc
gcgcacatcaccaaagtgggccagaacatcaagtacgaccttactattctcaagcactac
aaggtgcaggtgagcggtccgctgttcgacaccatgctggctcactacctgctggagccc
gatatgcgccacaacatggacgtgctggccgaaacctacctgcactacacacccgtgagc
attctggagctcatcggcccgaaaggcaaaaatcagaaaactatggccgacctgcccccg
gccgaggtgtcggactacgcctgcgaggacgccgacgtgacgctgcagctcaagcatgtg
ttcgagcccatgctcaaggaagtaggactgctggacttgctcaaccaagtagaaaatccg
ctggtgccggtgctggccgatattgagtacgaaggcgtgaaaattgactcttcggccatg
ggcgagtactcagccgagctgcagggctacatccaggatattgaaaagcagattttctcg
gaagccgggcaggagttcaacatcggctcccccaagcagctgggcgaagtgctgtttgat
aagatgggcctgggaggcggcaaaatcaagaaaacgaaaaccgggcagtacgctaccggc
gaggaaatcctgagccagctggcggccgatgcgcccattgccgggctgattctggaacac
cgccagcttaccaaactgcgcagcacctacgtggaggccctgccccagctggtgtgcgaa
gtagatggccgcgtgcatacctccttcaaccaggccgtaacggccacgggccgcctcagc
agcaccaaccccaacctgcagaacattcccattcgtaccgaaaaaggccgcgaaatccgg
aaagccttcgtgccccgcgacgagaaccacgtgctactggccgccgactactctcaggtg
gagttgcgcatcatggccgacttctcgggcgacaaaaccatgattgaagcctttcgccag
ggcctcgacattcataccagcacggccagcaaggtattccacgtgccgctgacggaggta
gacggggagatgcgccgcaaggccaaaaccgtcaactttggcatcatctacggcatttcg
gcattcggcttggcccagcgcatcggtatttcgcgcaaggaagccaccgagattatcgac
acctacttccaggagttttcgtcggtaaagcagttcatggacgacagcatcaacaaggcc
cgggagctggaatatgccaccacgttgctgggccgccgccgctacctgcgtgacatcaac
tcgcgcaacgccaccctgcgcggctacaccgagcgcaacgccatcaacgcccccatccag
ggcacggccgccgacatcattaagatggccatgatcaacatccacgagtggctgattcag
gaaaagctcggcaccaagatgatcctgcaggtccacgacgaactggtgttcgacgcggtg
caggaggaagtagaattcattacccccaagatcaaagagctgatgtccaacgccttgctg
ctcccccacggcgtgcccctggaggtagaagtaggcaccggccgcaactggctgcaggct
cactaa
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