Hymenobacter sp. BT18: HER32_09985
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Entry
HER32_09985 CDS
T06970
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hrs
Hymenobacter sp. BT18
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrs03016
]
HER32_09985 (truA)
Enzymes [BR:
hrs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HER32_09985 (truA)
Transfer RNA biogenesis [BR:
hrs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HER32_09985 (truA)
Prokaryotic type
HER32_09985 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QIX61487
LinkDB
All DBs
Position
complement(2377315..2378106)
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AA seq
263 aa
AA seq
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MRYFLHLAYDGTQYHGWQIQPNTVTVQQELDRRLSQVLRQPVYCLGSGRTDSGVHASHQV
AHFDAEVPESLDLPTLLYRLNRALPQDIRALAVHPVPAAAHARFDATARTYQYHVRLVPD
PFAPAHTLYLDRAPDVEAMNEAAAFLVGEHDFTSFSKVKGSEKHYRCHCYEAGWHRVPGG
LVFQIRANRFVRGMVRLVVGTLLDVGRGKLTPAQYGDVLRSLQRVHASGAAAAQGLFLCR
VEYPAELVANVTLPVGLPYFAST
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgcgctactttcttcacctggcttacgacggtacccagtaccacggctggcagattcag
cccaataccgtaacggtgcagcaggagctggatcggcgcctttcgcaggtgctgcgccag
ccggtgtactgcctgggcagcggccgcaccgactcgggtgtgcacgccagccaccaggta
gcgcacttcgacgccgaggtgcccgaaagcctcgacctgcctacgcttctctaccgcctc
aaccgggccctgcctcaggatatccgggcgctggccgtgcacccagtgcccgccgcagcc
cacgcccgcttcgatgccaccgcccgcacctaccagtaccatgtgcgcctcgtgcccgac
ccattcgccccggcccacaccctgtacctggaccgcgcccccgacgtggaggccatgaac
gaagccgctgcctttctcgtgggtgagcatgacttcaccagcttctcgaaggtgaaaggc
agcgaaaagcactaccgctgccactgctacgaggcgggttggcaccgcgtaccgggcgga
ctggtgttccagatccgggccaaccgttttgtgcggggcatggtgcggctggtggtgggt
accctgctggatgtaggccggggtaagctcacgccggcccagtatggcgacgtgctgcgc
agcttgcagcgcgtgcacgcgagcggcgcggcagcggcccagggcttgttcctgtgccgc
gtagagtaccccgccgagctggtcgccaacgtgaccctgcccgtgggtttgccgtacttt
gccagtacgtaa
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