Hymenobacter sp. BT18: HER32_10170
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Entry
HER32_10170 CDS
T06970
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hrs
Hymenobacter sp. BT18
Pathway
hrs03410
Base excision repair
hrs03430
Mismatch repair
hrs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HER32_10170 (recJ)
03430 Mismatch repair
HER32_10170 (recJ)
03440 Homologous recombination
HER32_10170 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrs03400
]
HER32_10170 (recJ)
DNA repair and recombination proteins [BR:
hrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HER32_10170 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HER32_10170 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HER32_10170 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Gla
Motif
Other DBs
NCBI-ProteinID:
QIX61520
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Position
complement(2414894..2416615)
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AA seq
573 aa
AA seq
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MQKRWIRKPAPDPEKVRHLADALRVNEAIIALLCQREICTFEEARSYFRPSLDDLPDPLL
MRDMDRAVERLLQALHTGEKVLVLGDYDVDGTTSVAVVYSYLGGFFEAEKVEYYIPDRYK
EGYGVSETGIEYAAEHGFSLIIALDCGVKSVEMVTYATRLGIDFIICDHHLPGDELPAAV
AVLDPKRADCPYPFKELSGCGVGFKLMQAFCHHLGHDEASLYDLLDLLVVSIAADIVPIT
GENRMLAYHGLRLLNDVQRPQRPGLDALRELAGLTGAQLNISSLVFGFSPRINAAGRMGD
AKRAVAMLLAGTKEEAIEKAGVVDKTNQERRGFDTRITKEALEMIEADAGLRNARSTVLY
NETWHKGVIGIVASRCLDKYYRPTIILTQSNGKATGSARSVVGFDVHQAILECSDLLEQF
GGHMYAAGLTLPVENVPAFQRRFEEVVSSRITDEQMIPPVEIDGQLELTDITSGFYKLLC
QMEPFGPGNSNPVFESRGVYALPDSARIVGNSHLKITLTQDGHHTVDAIGFGLGDYLPQI
LEGRPFNVCYTIELNEYRGVKSLQLRLKDICWE
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaacgttggatccgaaagcctgcgcccgaccctgagaaagtccggcacctggcc
gacgccttgcgcgtcaatgaggccatcattgcattgctgtgccagcgggagatatgcacg
tttgaggaagcccggtcgtatttccgaccctccctcgacgacctgccggacccactgctc
atgcgcgacatggaccgggccgtagaacgtctgctccaggccctccacaccggcgaaaag
gtgttggtgctgggcgactacgacgtggacggtaccacgtcggtggcggtggtgtattcg
tatctgggcgggttcttcgaagcggagaaagtcgagtactatatccccgaccgctacaag
gaaggctacggcgtttccgagaccggcattgagtacgccgccgagcatggcttctcgctc
attattgccctcgactgcggcgtgaagtccgtggagatggtaacgtacgctactcggttg
ggcatcgactttatcatctgcgaccaccacttgccgggggatgagctgccggcggccgtt
gccgtgctggaccccaagcgcgctgactgtccatatcccttcaaggagctttcgggctgc
ggggtagggtttaagctcatgcaggccttttgccaccatttaggccacgacgaagcctcg
ctctacgacctgttggatttgctggtcgtcagcattgcggctgatatcgtgcccatcacc
ggggaaaaccgcatgctggcatatcatggcctgcgcctgctcaacgatgtgcagcggccc
cagcggcccgggctggatgccctgcgagagttggctggcctgacgggggcgcagcttaac
atcagcagcctggtgtttggattttcgccccgcatcaacgccgctgggcgcatgggcgac
gccaagcgggccgtagccatgctgctggcgggcaccaaggaagaagccattgagaaagct
ggcgtggtcgacaaaaccaaccaggagcgccgcggcttcgatacgcgcatcaccaaggag
gccctggagatgattgaggccgacgccggtctgcgcaacgcccgctccacggtgctctac
aacgaaacctggcacaagggtgtcatcggcattgtggcctcgcgttgcctcgataagtac
taccggcccaccatcatcctcacccaaagcaacggcaaggccacgggctcggcccgctcc
gtggtcgggttcgatgtgcaccaggccattctggagtgctccgacttgttggagcagttc
ggaggccacatgtacgccgctggcctcaccctgcccgtcgaaaacgtaccggcctttcag
cgccgcttcgaagaagttgtttcctcccgcatcaccgacgagcagatgattccgccggtg
gaaattgatgggcagctggagctgacggatattacctcgggtttttacaagctcctatgc
cagatggagcctttcgggccgggcaactccaacccggtattcgagtcgcggggagtatac
gccctgcccgactcagcgcgcattgtgggcaattctcacctgaagattaccctcacccag
gatggccaccacacggtagatgccatcggctttggcttgggcgactacctgccgcagatt
ctggagggccggccttttaacgtgtgctataccattgagctaaacgaataccggggcgtg
aagtcgttgcagctgcgcctgaaggatatctgctgggagtag
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