Hymenobacter sp. BT18: HER32_11260
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Entry
HER32_11260 CDS
T06970
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
hrs
Hymenobacter sp. BT18
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrs03000
]
HER32_11260
Transcription factors [BR:
hrs03000
]
Prokaryotic type
Helix-turn-helix
Other families
HER32_11260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
GAF_3
AAA_5
HTH_8
AAA
AAA_2
AAA_16
Mg_chelatase
AAA_3
AAA_22
nSTAND3
AAA_7
Autoind_bind
DUF815
Motif
Other DBs
NCBI-ProteinID:
QIX61724
LinkDB
All DBs
Position
complement(2663843..2665948)
Genome browser
AA seq
701 aa
AA seq
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MPDQDDSLLLYLNDAIATTRNKETLFRTVTEKLRLIFPFDAITILTFDSEHQYRRVFLRD
YLGEILLPEQTDASGAKTTRGLIEGTPVELFVRQPRLHQYDLQELIEQFPQYQPFCALLD
KGMRYFVVVPLRTGGQLIGLLSLVARRRPEFAPNDVDLLEKIGSLVAVAVTNTLAFEDIA
RREQEKTMQLALNNALLSIKDRGELFRTIATEINQVVPCDFFGVRLRLPDSPIRAFAELV
KQPDGTFAALEENRWDDVPDFEEAKLGAAELFMRPGVYVGADFDALAERYTMLRYIRERR
GTQSLLCTPLDLGDEQTAALIMASHQPLAFTPEMLELILTLVPQVRLAIQNVLAFEQIEA
LRTQLERERTYLIDEINTTAAARFGDFVGGSPSMQQVFRRVEQVAPTDSTVLITGETGTG
KELVARALHNFSPRKERALVKINCAALPAQLIESELFGHEKGAFTGAHDRRIGKFELADG
GTIFLDEIGELPLDLQAKLLRVLQEKEFERIGGRRVIHTNVRVLAATNRVLEEEVAAGRF
RADLYYRLDVFPIHLPALRERPEDVEPLVRHFLERFTKKLGRPVRTLRPRDLKALQRYPW
PGNIRELEHVVERAVIASTGPSLEFAGFSANAAAAVPVAAPVPGPLKTLREQERDHILAA
LHQTGGRVSGPQGAAVLLDINAKTLEARMKKLGIRRAHTVE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaccaagacgattcgctcctgctgtacctgaacgacgccattgccacgacccgc
aacaaggagacgctgtttcgcaccgtcacggaaaagctgcggctgatcttccccttcgat
gctattaccattctcactttcgactccgagcaccagtaccgccgcgtgtttctgcgcgac
tacctgggggagatactgctgcccgaacagactgatgccagtggcgccaaaactacgcgt
ggccttattgagggcacgcccgtcgagctgttcgtccgccagccgcgcctgcaccagtac
gatttgcaggagctgattgaacagtttccgcagtatcagcccttctgcgccctgctcgat
aaaggcatgcgttacttcgtggtagtgcctctgcgcacgggcgggcagctcatcgggctg
ctttccctggtagcccggcgccgaccagagtttgcccccaacgacgtggacctgctggaa
aagattggcagcctggtggcggtggccgtcaccaacacgctggctttcgaggacatagcc
cgccgggagcaggaaaaaaccatgcagctagccctcaacaacgccctgctcagcattaaa
gaccgaggcgagctgttccgtaccatagctaccgaaatcaaccaggtagtgccctgcgac
tttttcggggtgcgcctgcgcctgcctgattcgcccatccgggcctttgcagagttagta
aagcagcccgatggcactttcgccgcccttgaggaaaaccgctgggacgacgtgcccgac
tttgaggaggccaagctaggtgcggccgagctgtttatgcggccgggtgtgtacgtgggg
gccgacttcgacgccctggccgagcgctacaccatgctgcgctacattcgggagcggcgc
ggcacacagtccctgctgtgtacgcctctcgacctgggcgatgagcaaaccgcggccctc
atcatggccagtcaccagccgctggccttcaccccggagatgctagagctcattctgacg
ctcgtgccccaggtgcggctggctattcagaacgtgctggcctttgagcagattgaagcc
ctgcgcacccagctggagcgggagcgaacctacctcatcgacgaaatcaacaccacggcc
gccgcccgcttcggcgactttgtgggcggcagccccagcatgcagcaagtgttccggcgc
gtggagcaggtagcccccaccgacagcaccgtgctcatcaccggtgaaaccggcaccggc
aaagagctggtagcccgggccctgcacaacttctccccccgcaaggagcgggccctggta
aagatcaactgcgcggccctaccggctcagttgatagaaagtgagctttttgggcacgaa
aaaggtgcttttacgggggcccacgaccggcgcatcggcaagtttgagctggccgacggc
ggcaccattttcctggatgaaattggggagctgcccctcgatttgcaggccaagctgctg
cgggtgctgcaggaaaaggagtttgagcgtattggcggacggcgcgtcattcataccaac
gtgcgggtgctagccgccaccaaccgcgtgctggaggaggaagtagccgctggccgcttc
cgcgccgacctctattaccgcctcgacgtgttcccgattcacttacctgccctgcgggag
cggcctgaggacgtggagcctctggtgcgccactttctggagcggttcaccaagaagctg
ggccgccccgtgcgtaccctccgcccccgcgacctcaaggcgctgcagcgctacccgtgg
ccgggcaacattcgggagctggagcacgtggtggagcgggccgttattgcttctactggg
ccgtcgttagagtttgcgggtttttcggccaatgcagccgcggcagtgccggtggcggcc
cccgtgcccggtccgctcaaaaccctgcgggagcaggagcgcgaccatatcctggccgcc
ctgcaccaaacgggtggccgcgtgagtggcccccagggcgcggccgtcctgttggacatc
aatgccaaaaccctggaggcacgcatgaagaagctcggcatccgacgggcgcacacggtg
gaatag
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