Hymenobacter sp. BT18: HER32_14205
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Entry
HER32_14205 CDS
T06970
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hrs
Hymenobacter sp. BT18
Pathway
hrs03030
DNA replication
hrs03430
Mismatch repair
hrs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HER32_14205 (dnaX)
03430 Mismatch repair
HER32_14205 (dnaX)
03440 Homologous recombination
HER32_14205 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrs03032
]
HER32_14205 (dnaX)
03400 DNA repair and recombination proteins [BR:
hrs03400
]
HER32_14205 (dnaX)
Enzymes [BR:
hrs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HER32_14205 (dnaX)
DNA replication proteins [BR:
hrs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HER32_14205 (dnaX)
DNA repair and recombination proteins [BR:
hrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HER32_14205 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_22
AAA_16
RuvB_N
AAA_5
RCF1-5-like_lid
AAA_14
Rad17
ResIII
AAA_30
Mg_chelatase
AAA_33
AAA_18
AAA_assoc_2
AAA_7
DNA_pol3_delta_C
AAA_2
RNA_helicase
SKI
AAA_28
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QIX62268
LinkDB
All DBs
Position
complement(3307371..3309515)
Genome browser
AA seq
714 aa
AA seq
DB search
MENFVVSARKYRPATFRSVVGQQHVTTTLQNAIASQHLAQAFLFCGPRGVGKTTCARILA
KTINCEFVEQHVRQGRPVSELLQTQPEIVPAALQQAADPDNTPFELEACGKCASCRAFQE
SASFNVHELDAASNNSVEDIRSLVEQVRYAPQQGRFKVYIIDEVHMLSNAAFNAFLKTLE
EPPSYAIFILATTERHKIIPTILSRCQIFDFNRIKVDDMRKHLRYVATQEHIQAEDDALH
LLAQKADGGLRDALSMFDQMVTFSGQNLRYQDVVQNLHILDYEYYFRLVDALLTENLSAT
LLLLDEVMQQGFDLHNFVVGAAEHLRGLLVCKDPVTVQLLEVSDNIRARYVQQAQAAPLA
FLLSALNLVSLCDREFKQAKNQRLHVELTLMKLAYLNGAVQFARDLQAAPANAPQASSDN
DEAKKKSSVNPGAAPAPVVAALNGLPSTNGTAEAPAPYVPAPTNPKPETRNPQPIHAPAD
PEPIVPVESGVEELHDTPSVEDEAATQVPPTRLVRDTVPHVDTGRPSVAGHEPGDAPVVA
APIRPLPSLTKGLGVASKLPSLTAMKEQAARQSAAPKAAVIEEDAPSAAPGTLPAIDDAR
LQQVWNELKELRKAGSMSEYTVLNRPVQADERHVIVLRVDNPVQEDVFNDFRADFLGELR
RRTGYPRLTVQVEVVEQQSTGRKLYTSADKFEYLAEKFPALVAMKQRLGLDTDF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttcgttgtttcggcccgtaagtaccgcccagccacgtttcgcagcgtggtg
gggcagcagcacgttactaccaccctgcagaacgccattgcctcccagcacctagcccag
gcgtttctgttctgcgggccccgcggcgtgggcaaaaccacctgtgcccgtatcctggcc
aaaaccatcaactgcgagtttgtagagcagcacgtgcgccagggccgcccggtgtcggag
ctgctccagacccagcctgaaatcgtgcccgcggcgctgcaacaggccgccgaccccgac
aacacacccttcgagctggaggcctgcggcaagtgcgcctcgtgccgggctttccaggaa
agcgcctcctttaacgtgcacgagctggacgcggcttccaacaactcggtggaagacatt
cgctccctggtggagcaggtgcgctacgccccgcagcagggccgctttaaggtgtacatc
atcgacgaagtgcacatgctctcgaatgcggccttcaacgcctttctgaagacgctggag
gagccgccaagctatgccatctttatcctggctaccaccgagcggcacaagatcatcccc
accattttgtcgcggtgccagatcttcgacttcaaccgcattaaggtggacgacatgcgc
aaacacttgcgctacgtggccacccaggagcacattcaggccgaagacgacgccctgcac
ctgctggcccagaaagccgacggcggcctgcgcgacgccctgagcatgttcgaccagatg
gtgacgttctcgggccagaacctacgctaccaggatgtggtgcagaacctgcacatcctg
gactacgagtactatttccggctggtagacgcgctgctgacggagaacctgtcggccacg
ctgctcttgctggatgaggtgatgcagcagggcttcgacctgcacaactttgtggtgggc
gccgccgagcacctgcgcgggctgctggtgtgcaaagaccccgtgacggtgcagttgctg
gaagtatcggacaacatccgggcgcgctacgtgcagcaggcccaggccgccccgctggcg
ttcctgctctcggccctgaatttggtgagcttgtgcgaccgggagttcaagcaagccaaa
aatcagcgcctgcacgtggagcttacgctcatgaagctggcgtacctgaacggggccgtg
cagtttgcccgcgacctgcaggcagctccggccaacgccccgcaagcatcgtcggacaac
gacgaggcgaaaaaaaaaagtagtgtaaatccgggagccgcgcctgcgccggtagtagcc
gcccttaacggcctgccgagtacgaacggcaccgccgaagccccggccccctacgtgccg
gccccaaccaacccgaaacccgaaacccgaaacccgcaacccatccacgcccccgccgac
cccgagcccattgtgccggtggaaagcggcgtagaggagctgcacgacaccccgagtgtg
gaagatgaggcagctacgcaggtgcctcccacccgcctggtgcgcgacacggtgccgcac
gtagacacgggccggcccagcgtggccggccatgagcccggcgacgctccggtggtagca
gctcctatccgcccattgccttcgctcaccaagggcctgggcgtggcttccaagctgccc
agcctcacggccatgaaagagcaggccgcccgccagagcgccgcgcccaaagccgctgtc
atcgaggaggatgccccgagtgctgcgcccggcacgttgcccgccatcgacgatgcccgc
ctgcagcaggtgtggaatgagctgaaggaactgcgcaaggccggcagcatgagtgagtac
acggtgctgaaccgcccggtgcaggccgatgagcggcacgtgattgtgctgcgcgtggac
aaccccgtgcaggaagacgtgttcaacgacttccgggccgacttcctgggggagctacgc
cgccgcacgggctacccgcgcctcacggtgcaggtggaagtagtggagcagcaaagcact
ggccgcaagctctacacctccgccgataagtttgagtacttggccgagaagtttcccgcc
ctggttgccatgaaacagcgcctgggcctggataccgacttttga
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