Hymenobacter sp. BT18: HER32_15115
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Entry
HER32_15115 CDS
T06970
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
hrs
Hymenobacter sp. BT18
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HER32_15115 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrs03019
]
HER32_15115 (rnc)
03009 Ribosome biogenesis [BR:
hrs03009
]
HER32_15115 (rnc)
03036 Chromosome and associated proteins [BR:
hrs03036
]
HER32_15115 (rnc)
Enzymes [BR:
hrs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HER32_15115 (rnc)
Messenger RNA biogenesis [BR:
hrs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HER32_15115 (rnc)
Ribosome biogenesis [BR:
hrs03009
]
Eukaryotic type
90S particles
RNase
HER32_15115 (rnc)
Prokaryotic type
rRNA processing factors
HER32_15115 (rnc)
Chromosome and associated proteins [BR:
hrs03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HER32_15115 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QIX62438
LinkDB
All DBs
Position
3510437..3511186
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AA seq
249 aa
AA seq
DB search
MPRPGQPLPLFGFFRRLLGQDRAFRQAIATLIGRTPDNIRLYQLAFTHSSLVRQQGEQAR
HQSNERLEFLGDAVLGTVVAEYLFQKYPYEQEGFLTEMRSRIVNRESLNGLALKIGLDKL
IQLDATQGRSTRSRSVNGNALEALVGAVYLDQGYKAARKFVLSRLIKPFVDVKAMTQTTT
NFKSKLIEWAQRHGKAIRYDLQGEARPGGVMEFTASVVLEDEVVATGMGLSKKQAEQLAA
ERALTALGV
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggcccggtcagcccttgccgcttttcggcttttttcgccggttgctggggcag
gaccgggcttttcggcaggccattgccacactcatcgggcgcacacccgacaacattcgc
ctgtaccagctggctttcacgcactcctcgctggtacgccagcagggggaacaggcccgc
caccaaagcaacgagcggctggagttcctcggcgacgccgtgctgggcacggtggtggct
gaatatctatttcagaaatacccgtacgagcaggaaggcttcctgacggagatgcgcagc
cgcatcgtgaaccgggaaagcctgaacggactggccctgaaaatcgggctagacaagctg
attcagctggacgccacccagggccgctctactcggtcgcgctccgtgaacggcaatgcc
ctggaggcgctggtaggcgccgtgtacctcgaccagggctacaaagccgcccgcaagttt
gtgctcagccgcctgatcaagcccttcgtggatgtgaaggccatgacgcagacaaccacg
aacttcaagagcaagttgattgagtgggcccagcgccacggcaaagccatccgctacgac
ctgcagggggaagcgcgccccggcggcgtgatggagtttaccgcttctgtggtgttggag
gatgaagtagtagctacaggcatgggcctaagtaaaaagcaggccgagcagctggccgcc
gagcgggccctgacggcgctgggggtataa
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