Hymenobacter sp. BT18: HER32_17235
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Entry
HER32_17235 CDS
T06970
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
hrs
Hymenobacter sp. BT18
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
HER32_17235 (ltrA)
Enzymes [BR:
hrs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
HER32_17235 (ltrA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
RVT_N
GIIM
HNH
HNH_5
Intron_maturas2
DUF6435
Motif
Other DBs
NCBI-ProteinID:
QIX62821
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Position
4007944..4009668
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AA seq
574 aa
AA seq
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MDTVMPQMDEWKALPWKKLQRTVFRLQKRIYQASRRGDTRQVRQLQKLLSKSRAAKLLAV
RKVTQDNQGKRTAGIDGVKSLTDKQRLRLGRRLSFRWAAKPLRRVWIPKPGSADKRPLGI
PVMRDRALQALVKLALEPEWEARFEPNSYGFRPGRSAHDALAAIYTCINQRAKWVLDADI
EKCFDRIDHPRLLAKVDTVPRFRRLLKGWLRAGVLEGDVFQPVEAGTPQSGVISPLLANI
ALHGMETVLRTHFRQRRISPTRLSPKVTLIRYADDFVVLHEDRAVVEACQQLLADWLAPL
GLAMKPAKTRLVHTRHATAEHPAGFDFLGTTVRQFVVGRTHSGKDQQGHLLGFKTLIKPS
RTAQHRHGQRLRDILFRQRASPQQALIRELNPVIRGWSQYYAGVVARDVFSRMDYVLYHG
LRRWAMRRHGGKHRRRIVRKYWRLEQGSWNFATPAGVQLRYHSFTRIQRHVKVAGTRSPF
DGDWPYWGARLRQYHGLDRRTCLLLKQQAGRCAWCHLCFTDTDVLEKDHRVPRIRGGKEE
LTNLQLLHRHCHHQKTKQDGSLAARGSGAQRGAV
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggacactgtgatgccacagatggatgaatggaaggccctgccctggaagaagctccag
cgtacggtcttcagactgcaaaaacgcatttaccaggccagccgccggggcgatacccgg
caggtgcgccaactccaaaaactactgagtaagtcccgggcggccaaactcctggccgtc
cgcaaagtcacccaggacaaccagggcaagcgcacggccggcatcgacggggtgaaatcg
ctcaccgacaagcaacgcctgcggctgggccgtcggctctcgtttcggtgggcggccaaa
ccgttgcgacgggtctggattccgaagccgggttcggccgacaaacgcccgctgggcatt
cccgtcatgcgcgaccgggccttgcaggcgctggtcaagctggcgctggaacccgaatgg
gaagcccggttcgagcccaacagctacggcttccggcccggccggtcggcgcacgacgcc
ctggcggccatctatacctgcatcaaccagcgggccaagtgggtgctggacgccgacatc
gaaaagtgctttgaccgcatcgaccacccgcggctcctggccaaggtggataccgtgccc
cggttccgccgcctgctcaagggctggctgcgggccggcgtgctggagggcgacgtgttt
cagcccgtcgaggccgggaccccgcaaagcggggttatctcgccgctgctggccaacatc
gccctccacggcatggaaacggtcctccggacgcacttccgacaacggcgcatcagcccc
acccgcctgagcccgaaagtgacgctgattcgctacgccgacgacttcgtggtcctccac
gaagaccgcgccgtggtggaagcctgtcagcaactactcgcggactggttggcgccgttg
ggactggccatgaagcccgccaaaacccggctggtgcacacgcggcacgccacggccgag
cacccggcgggcttcgatttcctggggaccaccgtgcggcagtttgtggtgggacggacc
cattcgggcaaggaccaacaggggcacctgttgggcttcaagacgttaatcaagccctcg
cgcacggcgcagcaccggcacggccagcggctgcgggacatcctgtttcggcaacgggct
tcgccccaacaggcgctgattcgggagctgaacccggtcatccggggctggagccagtac
tacgccggtgtggtggccagagacgtcttctcccgcatggactacgtgctctaccacggg
ctgcgccgctgggccatgcgccggcacggcggcaagcaccgccgacgcatcgtgcgcaag
tactggcggttggagcagggcagttggaactttgccaccccggccggggtgcaactccgc
taccacagcttcacccgcatccagcgccacgtcaaggtggcgggcacccgctcgcccttt
gatggcgactggccgtactggggcgcgcgactgcggcagtaccacggcctggaccggcgc
acctgcctgctgctgaagcagcaagccgggcgctgcgcgtggtgccacctgtgcttcacg
gacacggatgtgctcgaaaaggaccaccgcgtaccccgaatacgcggcgggaaggaggag
ttgacgaatctacagctgctgcaccggcattgtcaccaccaaaagacgaagcaggacggc
agcctggcagctcgcggtagcggtgcacaacgaggagccgtgtga
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