Hymenobacter sp. BT18: HER32_17660
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Entry
HER32_17660 CDS
T06970
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hrs
Hymenobacter sp. BT18
Pathway
hrs03420
Nucleotide excision repair
hrs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HER32_17660
03430 Mismatch repair
HER32_17660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrs03400
]
HER32_17660
Enzymes [BR:
hrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HER32_17660
DNA repair and recombination proteins [BR:
hrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HER32_17660
MMR (mismatch excision repair)
Other MMR factors
HER32_17660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
Viral_helicase1
UvrD_C
UvrD_C_2
AAA_19
PhoH
DEAD
SLFN-g3_helicase
AAA_30
AAA_16
NACHT
ResIII
nSTAND3
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QIX62900
LinkDB
All DBs
Position
complement(4123114..4125159)
Genome browser
AA seq
681 aa
AA seq
DB search
MNATEQEEREYLEEIKEKLTLAVRRVDDAVRQFSTELRQKKQYIHEHQSGMDEADMVAAD
QSINRMALTGEGAVARKRRLIKLVQSPYFGRLDFAPQNQAAAPVYIGVHSFFDEQQRQNL
IYDWRAPISSLFYDFELGEASYATPSGTVHGRIGLKRQYKIRDGRLEFLLDSAVNIHDDV
LQQELAKSSDDKMKNIVATIQRDQNAVIRNEEATVMVIQGVAGSGKTSIALHRIAFLLYR
YRETISAKDILIISPNKVFADYISNVLPELGEEHIPEMGMEELAADLLEGRYQFQTFFDQ
VAALLEQHDAAFIARIQFKSSFEFLSQLNQYLLHIENTYFAVADLRVGRTVVPAAFTQQR
FRAYHRVPLLNRFALVANDVRAYVRDKAGRKLTGQEKATIGEGIPRMFKFNNVLDLYRDF
YRWLGRPELLKLDHHRPLEYADVFALIYLRIRLEGASAYGHVKHLLVDEMQDYTPVQYAV
LSRLFHCRKTILGDVSQTVNPYSASSAETIERVFPQADVVKLYRSYRSTIEITAFAQRIT
PNPRILPLERHGPEPAVQAFSTKEEELQAIQQLLANFQTSGRHSLGIICKTLPQAKQAYE
TLQASGVYLLTDESTKFKEGVIITTAHLAKGLEFDEVIVPFASARNYKTEVDRSMLYVAC
TRAMHQLTLTYTGEQPAFLQA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaccgagcaagaagaaagagaatacctggaagaaatcaaggagaaactcacg
ctggcagtgcggcgagtggatgatgccgtccggcagttttccacggaattgcgccagaaa
aagcagtacatccacgagcaccagtcgggcatggacgaagccgacatggtggccgccgac
caatccatcaaccgcatggccctcacgggcgaaggcgccgtggcccgcaagcgccgcctc
attaagctggttcaatccccgtacttcggccgcctcgattttgcgcctcagaaccaggcc
gctgcgccggtgtacatcggggtgcattcctttttcgacgagcagcagcgccagaacctg
atttacgattggcgcgcgcccatttcttcgttgttctacgactttgagctgggggaagct
tcctacgccacgccctcgggcaccgtgcacggccgcatcggcctgaagcggcagtacaaa
atccgggatgggcgcctggagttcctgctcgacagcgccgtaaacatccacgacgacgtg
ctgcagcaggagctggccaagtcctccgacgataagatgaaaaacatcgtcgccaccatc
cagcgcgaccagaacgcggtgatccgcaacgaggaagctacggtgatggttattcagggc
gtggccgggtcgggcaaaacgtccattgccctgcaccgcattgccttcctgctttaccgc
taccgcgaaaccatttcggccaaggatattctcatcatctcacctaacaaggtttttgcc
gactacatttccaacgtgctgccggagctgggcgaggagcacattccggaaatgggcatg
gaagagctggccgccgacctgctcgaaggccggtaccagttccagacgttcttcgaccag
gtagcggctttgctggagcagcacgacgcggcctttattgcgcgcattcagttcaagtcg
tcgtttgagtttctgagccagctcaaccagtatctgctgcacatcgaaaacacttatttc
gccgtggccgacctgcgcgtgggccgcaccgtggtgccagcggccttcacccagcagagg
tttcgggcctaccaccgggtgcccctgctcaaccggtttgcgctggtggctaacgatgtg
cgggcctacgtgcgcgataaagccgggcgcaagctcacgggccaggaaaaagccaccatt
ggggaaggtattccgcgcatgttcaagttcaacaacgtgctggacctgtaccgggatttt
taccgctggcttgggcggccggagctgctgaagctggaccaccaccggcccctggagtac
gccgatgtgtttgccctgatttacctgcgcatccgcctggaaggcgcctcggcttacggc
cacgtgaagcacctattggtagacgaaatgcaggactacacgcccgtgcagtacgcggtg
ctgtcgcgcctgttccactgccgcaaaacaattctgggcgacgtcagccagacggtgaat
ccgtacagtgcgtcctcggccgaaaccattgagcgggtgtttccgcaggccgatgtggtg
aagctttaccgcagctaccggtccactatcgaaattaccgccttcgcccagcgcatcacc
cccaacccccgtattctcccgctggaacgacacggtccggagcccgctgtgcaggctttc
agcactaaggaagaggaactgcaggccattcagcaactgctggcgaacttccaaacttcg
ggccgtcattccctgggcattatctgcaaaaccttgcctcaggccaagcaggcctacgag
actctgcaggcctcgggcgtatatctgctcacggatgagtcgaccaaattcaaggaaggc
gtcatcatcaccacggcccacctggcgaaagggctggaattcgacgaagtaatcgtgccc
tttgcttcggcccggaattacaagacggaggtggatcggagtatgctctacgtagcctgc
acccgggccatgcaccagcttactcttacatacacgggtgagcagcccgcctttctgcag
gcctaa
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