Hymenobacter sp. BT18: HER32_17995
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Entry
HER32_17995 CDS
T06970
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
hrs
Hymenobacter sp. BT18
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
AAA_3
AAA_16
AAA_30
AAA_22
Herpes_BLRF2
AAA_19
AAA_2
MCM
AAA_18
nSTAND3
ABC_tran
DUF4944
Motif
Other DBs
NCBI-ProteinID:
QIX62960
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Position
complement(4194863..4196041)
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AA seq
392 aa
AA seq
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MPRILIIDDERAIRNTLKEILEYENYQVSQAEDGPTGLDMLIKDKYDVVLCDVKMPKMDG
IEVLERARIVAPEAAFIMVSAHGNVEMAVDATKKGAYDFLQKPPDLNRLLVTVRNALDRT
KLATETTKLATENKTLKKKLAKNSEMVGDSAALGAVRKAIEKVAPTDARVLITGPNGAGK
EMVARQLHELSNRASGPLVEVNCAAIPSELIESELFGHEKGSFTSAVKQRIGKFEQADGG
TLFLDEIGDMSLSAQAKVLRALQENKITRVGGEKEISVNVRVLAATNKDLLQEIADRNFR
EDLYHRLSVILIQVPALNDRREDIPALIQKFLQDIAQDYGDKPKKIDDAALGYLQSLDWR
GNIRELRNVVERLVIMSDDTITEADARAFAGK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcatcctgattattgacgacgaacgcgctatccggaacaccctgaaagaaatt
ctggagtatgagaactaccaggtaagccaggccgaagatggccctaccggcctggatatg
ctcatcaaagacaagtacgacgtagtgctctgcgacgtgaagatgcccaagatggatggt
attgaggtgttggaaagggcccgtattgtggcgccggaagccgcctttattatggtctca
gctcatggcaacgtggaaatggccgtggatgccaccaaaaaaggcgcctacgatttcctg
cagaagccaccagacctgaaccgcctgctcgtgacggtgcgcaacgccctggaccgcacc
aagctggccaccgaaaccaccaagctagccacggaaaacaaaaccctgaagaaaaagctg
gccaaaaactcggaaatggtgggcgactcggcggccctgggtgccgtgcgcaaggccatt
gagaaggtagcccccaccgatgcccgcgtgctcataacaggccccaacggagccggcaag
gaaatggtagcccgccagcttcacgagctcagcaaccgcgccagcggcccgctggtagaa
gtaaactgcgccgctattccgtccgagctgattgagtcggaactgtttggccacgaaaaa
ggctcctttacctcggccgtcaagcagcgcatcggcaagttcgaacaggctgacggcggc
accttgttcctcgacgaaatcggcgacatgagcctctcagcgcaggccaaggtgctccgg
gctctgcaggaaaacaagattacccgcgtgggcggcgaaaaggaaatttcggtgaacgtg
cgcgtgctggccgccaccaacaaagacctgctccaggaaatagccgaccgcaacttccgg
gaagacctctaccaccgcctctcggttatcctgatccaagtgcctgccctcaacgaccgg
cgcgaagacattccggccctcattcagaaatttctgcaggacattgcccaggactacggg
gacaagcccaagaagattgacgacgcggctttgggctacctacaaagcctcgactggcgc
ggcaacatccgcgagttgcgcaacgtggtagagcgcctcgtcattatgagcgacgacacg
attacggaggctgatgcccgcgcctttgccgggaaatag
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