Hymenobacter sp. BT18: HER32_18840
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Entry
HER32_18840 CDS
T06970
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hrs
Hymenobacter sp. BT18
Pathway
hrs03420
Nucleotide excision repair
hrs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HER32_18840
03430 Mismatch repair
HER32_18840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrs03400
]
HER32_18840
Enzymes [BR:
hrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HER32_18840
DNA repair and recombination proteins [BR:
hrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HER32_18840
MMR (mismatch excision repair)
Other MMR factors
HER32_18840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
ResIII
PAH
DEAD
AAA_11
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QIX63113
LinkDB
All DBs
Position
complement(4399751..4402009)
Genome browser
AA seq
752 aa
AA seq
DB search
MGLDYLSLLNPSQAAAVMQIDGPCMIIAGAGSGKTRVLTYRIANLLEQGVDPFHILALTF
TNKAAKEMRARIEKVVGPNAKNLWMGTFHSIFARILRSEADKIGYPRSFTIYDTQDSKTL
IGQILKELELDDKMYKPNMVLSRISSAKNKLISVQQYLNDPVIRQDDEAAMRPKLGVIYQ
QYANRCFKAGAMDFDDLLYQTNVLFKDHPDVLNKYQHIFRYVMVDEYQDTNYSQYLIARK
LAAKDRNICVVGDDAQSIYAFRGADIQNILNFEKDYPELQVFKLEQNYRSTKTIVKAANS
VIKNNQAQLRKDVFSDNEEGPLIEVLKAASDNEEGKLVANSIYEDKMNQHLSYDDFAILY
RTNAQSRAMEEALRKLNIKYKIVGGLSFYQRKEIKDLVAYLRLTVNPNDEQALRRVINYP
KRGIGDTTIAKLINAAEESNHTIWEVVSNADQFLPTRAANPIVDFAEKIKAYTAVAAKED
AFEAAKFIAKNSGMIEELYADKSIEGLSRYENIQELLNGVKAFVEDPEREEKSLSAFLQD
IALVTDADTKDAQSEGEQVTLMTIHSAKGLEFRNVYIVGLEENLFPSQMMITSRADLEEE
RRLFYVAITRAEKKLTLSYATSRYQWGNLRSCEKSRFLDEIDPQYVDFKFSAGPIGSAGP
GESPFGHVFERRSNLVPQAPRKLAATKYTPPADFKPSDTSNLQTGQRVEHPKFGFGTVTK
LETVQGSTKAIIEFEEVGEKTLLLSFAKLRVH
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgggactggattatctttcgttattgaacccctcgcaggcggccgccgtgatgcaaatc
gacgggccctgcatgattatagccggcgcgggctcgggcaaaacccgggtgcttacctac
cgcattgccaacctgctggagcagggcgttgacccgtttcacatcctggccctcaccttc
accaacaaggcggccaaggaaatgcgcgcccgcatcgagaaagtggtggggccaaatgcc
aagaacctgtggatgggcaccttccacagcatcttcgcccgcattctgcgctccgaggcc
gataaaatcggttacccccgctccttcaccatctacgacacccaggactcgaaaaccctc
atcggccagattctgaaggagctggagctggacgataagatgtacaagcccaacatggtg
ctgagccggatttcctcggccaagaacaagctcatttcggtgcagcagtacctcaacgac
cccgtcatccggcaggacgacgaggcggccatgcgacccaagctcggcgtgatttaccag
cagtacgccaaccgctgcttcaaggccggggccatggacttcgacgacctgctctaccag
accaacgtgctgttcaaggaccaccccgatgtgcttaacaagtaccagcacattttccgg
tacgtgatggtggacgagtaccaggacaccaactactcccagtacctgattgcccgcaag
ctggcggctaaggaccgcaacatttgcgtggtgggcgacgacgcgcagagcatctacgcc
ttccgcggggccgatattcagaacattctcaacttcgagaaggactaccccgagctgcag
gtgttcaagctggagcagaactaccgctccaccaaaaccattgtgaaggcggccaactcc
gtcatcaaaaacaaccaggcccagctgcgcaaagatgtcttctccgacaacgaggagggc
ccgctgattgaggtgctgaaagccgcttccgacaacgaggaaggcaagctggtggccaac
agcatctacgaggacaagatgaaccagcacttgtcctacgacgactttgccatcctgtac
cgcaccaatgcccagagccgggccatggaggaagccctgcgcaagctcaacatcaagtac
aagattgtgggcggcctgagcttctaccagcgcaaggaaatcaaggacctggtggcctac
ctgcgcctcacggtgaaccccaacgacgagcaggccctgcgccgcgtcatcaactacccc
aagcgcggcatcggcgacaccaccattgccaagctcattaacgcggctgaggagtcaaac
cacaccatctgggaggtagtcagcaatgccgaccagttcctgcccacgcgtgcggccaac
cccattgtagacttcgccgagaaaatcaaggcgtacacagccgtggcggccaaggaagac
gcatttgaggccgccaagttcattgccaagaactcgggcatgattgaggagctctacgcc
gacaaaagcatcgagggcctctcccgctacgagaacatccaggaactcctgaacggcgtc
aaggccttcgtggaagaccccgagcgcgaggaaaagagccttagcgccttcctgcaggac
attgcccttgttacagacgccgacaccaaggacgcccagagtgaaggcgagcaggtaacg
ctgatgaccatccactcggccaaggggctggagtttcgcaacgtgtacatcgtaggcttg
gaggaaaacctctttcctagccagatgatgattacctcccgggccgatctggaggaggag
cgccgcctgttctacgtggctattacgcgggccgagaaaaagcttaccctaagctacgcc
acgtcccgctaccagtggggcaacctgcgcagctgcgagaaaagccgcttcctcgacgaa
atcgacccgcagtacgtggacttcaagttctcggccgggcccatcggcagcgccggaccg
ggcgagtcgccgttcgggcacgtgtttgagcggcgcagcaacttggtcccccaggctccg
cgcaagctggccgccaccaagtacaccccgcccgccgatttcaagccctccgacaccagc
aacctgcaaaccggccagcgcgtagagcatcccaagttcggctttggcaccgtgaccaag
ctcgaaaccgtgcagggctccaccaaagccattattgagtttgaggaagtaggcgagaaa
acgctgctgctttccttcgccaagctgcgggtacactaa
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