Hirundo rustica (Barn swallow): 120747574
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Entry
120747574 CDS
T09369
Symbol
NCSTN
Name
(RefSeq) LOW QUALITY PROTEIN: nicastrin
KO
K06171
nicastrin
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120747574 (NCSTN)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
120747574
NCBI-ProteinID:
XP_039909516
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Position
29
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AA seq
699 aa
AA seq
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MLRGAPGAARSSLGMLRALLVAALAAAPCLGNSVQRKIYIPLNRTAPCVRLLNATHQIGC
QSSLSGDTGVIHVVEKEEDLEWALSTGPNPPYMILLDGNLFSRKILMQLRGNSRISGLAV
ALPSDPPPEGFSPGLQCPNDGFGVYSEDYGPQFAHCNGSVWNPGGSGISYEDFPFPIFLL
EDPNETQVIKECFRAHNLGAAPRFPLCAMQLQARMHAAASTVSCMRRSSLQSAFSINPEI
VCDPLLDYNVWSSLHPINSSGKVEPGQRLVLAATRVDSHSFFWNVAPGAEGAVGSFVALL
AAAAALQAAPGAQRLPRNVLFVFFQGETFDYIGSSRLVFDMEQEKFPLRLENVGAFLELG
QVSLRNDSVLWMHTDPVSRQNASVDFQVKTLLAALRDSSSGSGVSLREPGFSQPLPPSSF
QRFLRSRSIPGVVLSDHRAAFHNRYFQSIYDTAENIGMRYPEGLSPEQRLRFVTGTAQAL
AQVATLLARALFSLAGGGAGSESIRADPETVTQLLYGFLIDSNNSWFQSVIKPDQNGILG
PFPQHYVAVSSPTNTTQLLQAVLGNLTGTRLNLSREECQNPGKTPGMQPELFEYWWVQGP
RDGNSSARIPGCVRSGARLSPALSPAFELRRWDSREFSTWTESRWKEIRARIFLVASRDM
ELLTLFLGFLVLLLSLLLTFLINSKAALLFGPPPGPSGY
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgctccggggtgctccgggagcggcccgcagctccctggggatgctccgcgcgctgctc
gtggcggcgctggcggcggctccgtgcctcgggaattccgtgcagaggaagatttacatc
ccgctgaaccgaaccgcgccctgcgtgcgcctgctcaacgccacgcaccagatcggctgc
cagtcctcgctcagcggggacacgggcgtgatccacgtggtggagaaggaggaggatctg
gaatgggccctttccacgggccccaaccccccctacatgatcctgctggacgggaatctc
ttctccaggaagattttgatgcagctgagggggaattcccggatttccggcctggccgtg
gctctcccctctgacccccctcccgaaggattttccccgggattgcagtgtcccaacgat
ggatttggggtttactccgaggactacggcccgcagttcgcgcactgcaacggctccgtc
tggaatcccggcggcagcggaatttcctacgaggattttcccttccccattttcctgctg
gaagaccccaacgagacccaagtgatcaaagagtgtttccgcgctcacaacctgggcgcg
gcgccgcgcttcccgctgtgcgccatgcagctgcaggcgcgcatgcacgcggccgccagc
accgtcagctgcatgcggcgcagctcgctgcagagcgccttcagcatcaacccagagatc
gtgtgcgacccgctgctggattacaacgtctggagctccctgcatcccatcaattcctcg
ggaaaggtggagcccgggcagcgcctcgtcctggccgccacgcgggtggacagccactcg
tttttctggaacgtggctccgggcgccgagggcgccgtcggctccttcgtggcgctgctg
gcggcggcggcggcgctgcaggcggctccgggcgcccagcggctccccaggaacgtgctc
ttcgtcttcttccagggggagacctttgattacatcggcagctcccggctggtgttcgac
atggagcaggagaaattcccgctgcgcctggagaacgtcggcgccttcctggagctgggg
caggtgtccctgcggaacgactccgtgctctggatgcacacggatcccgtctcccgccag
aacgcatccgtggatttccaggtgaagactctcctggccgcgctgcgcgattccagctcc
ggctccggcgtttccctgcgggagccgggattttcccagcccctcccgccctcgtcattc
cagaggttcctgagatcccggagcattcccggtgtggtgctcagcgaccaccgggcggcc
ttccacaacaggtacttccagagcatctacgacacggccgagaacatcgggatgcgttat
cccgaggggctgagcccggagcagcggctgcgcttcgtcaccggcaccgcccaggcgctg
gcgcaggtggcgacgctgctggcccgggccctcttctccctggccgggggcggcgccggc
tccgagagcatccgggcggatcccgaaacggtcacccagctgctctatggattcctgatc
gactccaacaattcctggttccagtccgtgatcaaacccgaccagaacgggatcctgggc
ccctttccccagcactacgtggccgtctccagccccaccaacaccacgcagctgctccag
gccgtgctggggaacctgaccgggacacggctcaacctgagccgggaggagtgccagaat
cccgggaaaacgccgggaatgcagcccgagctgtttgagtactggtgggtgcagggcccc
cgggacgggaattcctccgcccggattcccggctgtgtccgctctggcgcccgcctgtcc
ccggcgctgtcccccgccttcgagctgcgccgctgggattcccgggaattctccacctgg
accgagagccgctggaaggaaatccgggcacggatcttcctggtggccagcagggacatg
gagctgctgacgctgttcctggggttcctggtgctgctcctgtcgctgctcctcaccttc
ctcatcaattccaaggccgcgctgctcttcgggcccccgcccggcccctcgggatactga
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